Brassica napus (rape): 106437580
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Entry
106437580 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106437580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106437580
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106437580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
DUF445
Motif
Other DBs
NCBI-GeneID:
106437580
NCBI-ProteinID:
XP_013733976
UniProt:
A0A816QZS4
A0ABQ8EFY5
LinkDB
All DBs
Position
C1:1160150..1162531
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AA seq
489 aa
AA seq
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MSSFNLFSTPQQPQQQTTTPSPFQTQPQQPSFQPQTNSFFSQPPQQQNQTPSFQPQQFQQ
QQQPQQQVQQLYLFTNDKAPASYGTKWADLHPDSQKLLLQIEGKILEYRSESQRLDQCSR
LYDSSVSTEGFEFDASRIVQELGGINTTMDRQKAVLHELMVVVKAMLRDSEVAVRSFIML
QPRFPQSKPAGGGGAAAGSEAQGANPAAASSSGHQQQGVASVVQVSDFYRGVPRKPTVFL
QQTVARFEKYLGECRQWVEELEQLLALDSDKFSRRVSLLESLPKVISNVHDFFVHVAAKV
ENIHQYIESMRTAYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPANTTTVT
QTSTQVAGLITSSNAPPASAAFPTPNSSSGGGLFLSTPASSAPATSLFATPSSAAPSSSL
FGPTTTPSQTPLFGSSPASTFGSAPSLFGQPTPSIAATPSQFAGITPGSGASFGSMTKYS
RPKSRTSRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcaatctattctccaccccacaacagccccagcaacaaacaacaactcct
tctccctttcaaactcagccacaacagccctcgtttcagccgcagaccaattccttcttc
tcccaacctccacagcagcagaatcaaacgccgtcgtttcagccgcaacagttccaacaa
caacaacaaccacaacagcaagtacagcagctgtatctcttcacgaacgataaagccccg
gcgagttacggcaccaagtgggcagatcttcaccccgattctcaaaaactcctcctccag
atcgaagggaagatattggagtacagaagcgagagtcagaggttagaccaatgcagtcgt
ctttacgattcctctgtttcaaccgaagggttcgagttcgatgcaagccgcattgttcag
gagcttggtgggattaacactacaatggacagacaaaaagctgttctccacgagcttatg
gtggttgttaaagccatgctgcgtgattccgaggttgctgttcggtctttcattatgcta
cagccaagattccctcaatctaagccagctggaggaggaggagctgctgctggttctgag
gcgcagggagctaatccggctgctgcttcttcctctggtcatcaacagcaaggagttgct
tccgttgttcaagtttctgatttttaccgtggggttccgaggaagcccactgttttctta
cagcagacggttgcgaggtttgagaagtatctaggcgagtgtagacagtgggttgaggag
ctggagcagctgcttgctttggattccgacaagtttagtcggcgcgtttctcttttggag
tctcttccgaaagtcatctctaatgtccatgacttctttgttcatgtcgctgctaaggtt
gagaatattcaccaatacattgagtcgatgaggacggcgtatcttgctgaccagcggcgg
agaggagagtgccatgacccgtttcttgaggctgatcggagggaaacagcgaaacaagaa
gctgctgctaaaagagtccacccaactcttcatctacctgctaacactactacagttaca
caaacctcaacccaagttgctggattgattaccagctcaaatgctccaccagcatctgca
gcctttccaacaccaaactcttcttcaggaggtgggttgtttcttagcacgcctgcttct
tctgcacctgcgacttctctatttgctacaccatcttctgctgctcctagctcttctttg
tttggaccaacaactactccttcgcagacaccactctttggttcttcaccggcttctacg
tttggttctgctccatctttgtttggacagccaactccatctattgctgctactccttca
cagtttgcaggtattacaccgggttcaggagccagcttcggttctatgactaaatactca
aggccaaaatctagaacttcccgccgttag
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