Brassica napus (rape): 106437662
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Entry
106437662 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106437662
04121 Ubiquitin system [BR:
bna04121
]
106437662
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106437662
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106437662
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106437662
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
Zf_IFT144_1st
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H_2
HypA
zf-RING_5
zf-HC5HC2H
FAR1_N
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
106437662
NCBI-ProteinID:
XP_013734043
UniProt:
A0A078H4K7
LinkDB
All DBs
Position
A10:10577908..10579815
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AA seq
352 aa
AA seq
DB search
MEETMAARYWCHMCSQMVNPVTESEIKCPFCQSGFIEEMSSNGNGSGVQDPGTDRAMSLW
APVLLGMMSTPRRPRRFRRAEFEFDEEEEEEDNDNDVYRHHLARRHGGEIDLDREFESLL
RRRRRSSGNNILQLLQGIRAGIASEYDTSDDRESNRVIMINPLNQSLVVQGQQAQSSHHP
ALTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEVVDALPTVKITDPLLQCSVCLDE
FEKGVEEEAKEMPCKHKFHVKCIVPWLELHSSCPVCRFELPSGDGDGSKVESERQTRTRT
TVPESSNGNVVENVEGNGREDDARSGNGRRFSFSWPFSGFFSSSSSSSGSSR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcagctaggtattggtgtcacatgtgttcacaaatggtgaatcca
gtaacggaatctgagatcaaatgtcccttttgccaaagcggattcatcgaagaaatgagc
agtaatggtaatggaagtggcgttcaagacccgggaacagaccgtgctatgtctctatgg
gcaccagtcttgcttggaatgatgagtactcctcggagaccaagaaggtttaggagagca
gagtttgagtttgatgaagaagaagaagaagaagacaatgataatgatgtctaccgtcat
catctagctagacgacacggtggagagattgatctggacagagagtttgaatctctctta
aggagaagacgaagaagctcagggaataatatattacagttgcttcaagggatacgcgca
gggattgcttctgagtacgacacgtctgatgatcgagagagcaatagagttataatgatc
aatcccctgaaccagtccctcgtcgttcaaggacaacaagcgcagagtagccatcatcct
gctttgacttcgcttggagattacttcatcggacctggtctagatcttttgcttcagcat
ttagctgagaatgatcccaacaggcaagggactccacctgctcgcaaagaagtggtcgat
gctttgcctacggttaagattactgacccgttgctgcagtgttcggtttgtttggatgag
tttgagaaaggagtggaggaggaagctaaagagatgccgtgtaagcataagtttcacgtt
aagtgtattgttccgtggcttgagcttcatagctcttgtcccgtgtgtcggttcgagctt
ccttctggggatggtgatggaagtaaggttgaatcggagagacaaacgaggacaagaact
actgttccggagagtagtaacggaaacgttgttgagaatgtggaagggaatggaagagag
gatgatgcgaggagcggtaatggaagaaggttttcgttttcatggccatttagtggattc
ttctcttcttcttcatcatcctctggatcttctcgctga
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