Brassica napus (rape): 106437752
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Entry
106437752 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106437752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106437752
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106437752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_33
TIP49
AAA_22
AAA_2
AAA_14
AAA_28
RNA_helicase
nSTAND3
AAA_17
Rad17
NPHP3_N
AAA_18
IstB_IS21
Mg_chelatase
TsaE
Viral_helicase1
Vps4_C
Bac_DnaA
ABC_tran
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
106437752
NCBI-ProteinID:
XP_013734161
LinkDB
All DBs
Position
A3:complement(7501310..7504419)
Genome browser
AA seq
743 aa
AA seq
DB search
MGRRDVGGRNNSRRDLSRAMDSCGKDLSTAEEIVDALRSCRYGKYERMSRQALVLNVRNV
LDARHNNKKRVKEDQEDDDSDEGARGGKMKKQRRKSVSSYSSSEDSGGHISTSEYAKFDL
TSECLRGGYAKLNSSTKLAPPPPPPLSGKVGPTFKDFAGIKKVLDELDQYILSPLLNPPL
FGKIGAKPPSGILFHGPPGCGKTRLAHAVANEAGVPFYQISATQVLSGVSGESEENIREL
FSKAYRTAPSIVFIDEIDAIGSKRENQQRETEKRIVTQLLTCMDGPPPGDTAAAAGYVVV
IGATNTPDALDPALRRGRRFGREIALTAPDEHARAEILSLVAQRLRLEGSLDMKRIARLT
PGFVGADLEELADMAASLCVKRIMDSRKLQLSGDSDDGDDRSWLSQPWSDEDLDKLFVRM
SDFEEAVKLVKGSLTREGFSTVPDVTWDDVGGLDHLRTELDDYVVNPIKYPDAFEKFGKK
LLETGFLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVGESERAIRTLFQRART
SSPCVIFFDEVDALTGRRGREGDHLVVGGLLNQFLTELHGGDRRDVYVIGATNRLDVIDG
AFLRPGRFANLVYVPLPNAYERVSILKSIAKKRPIDPSVDLDAIATKYCEDFSGADLANL
MDKAIHVAVKEKIQSSKSSEDGDMDLSDCTIKMTHFKQALSLVTPSVTKQQIKHYEEQRD
RHHRLQSSTNMDQINVGPSFTFE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagagatgtgggcggaagaaataatagtaggagagatttgagtcgagctatg
gattcgtgcgggaaggatttatctacagcggaggaaatcgtggacgccctccgttcctgc
aggtacggtaaatatgagaggatgtcccgtcaagcacttgtcctcaacgtcagaaatgtc
cttgatgcccgacacaacaacaagaagcgtgtgaaagaagaccaagaggatgatgattct
gatgaaggtgctcgtggtggtaagatgaagaaacaaagacgtaagtcagtttcttcttat
tcttcgtcggaagacagtggcggccatatctcgacttctgagtacgctaagtttgatttg
accagtgagtgcttaagaggtggctacgctaagttgaatagctccacgaaacttgctcct
cctcctcctcctcccttgagtggtaaagtaggacctacttttaaagactttgccgggatt
aaaaaagtgttggatgagttggatcagtatattctgtcccctcttctcaatcctccattg
tttgggaagattggagccaagccaccaagcgggattctattccatggaccacctggctgt
ggaaagactcgcttggcccatgccgtcgccaacgaagctggcgttcccttttatcagatt
tcagccacacaagttctttctggtgtttctggtgagtcagaagagaatattagagagctc
ttctctaaagcatacaggactgcgccttctattgtgtttatcgatgagattgatgcaatt
ggttccaagagagagaaccagcaaagggagactgagaagcggatcgtaacacaactattg
acttgtatggatggccctcctcctggagatacggctgctgctgctggatatgttgttgtc
attggagctactaatacccctgatgctcttgatcctgctctcagaaggggtaggcgattt
gggcgtgagattgctctaaccgctcctgatgaacacgccagggctgaaatactctctctc
gtagctcaaagacttagactcgaaggttccttagacatgaaaagaatcgctcgcttaaca
ccaggttttgttggagctgatttggaagagttagctgacatggctgccagtctttgcgta
aagagaatcatggattcaagaaaattgcaactctccggcgacagtgatgatggtgatgat
agatcttggctgagccagccctggtcggacgaagatttggataagctctttgtcagaatg
tctgattttgaggaagcagtcaagttagttaagggatctttaactagagaaggtttctct
accgtgccagatgtcacatgggatgatgttggtggacttgaccatctaaggaccgaactc
gacgattacgtagtcaaccctattaaatatccagacgcgtttgagaaatttggaaagaag
ttgttagagacaggtttcttgctgtatggaccaccgggttgtggaaagactttggttgca
aaggcagttgcaaacgaggcaggagctaatttcatacacatcaagggtccagaacttcta
aataaatacgttggagaaagcgagcgtgctattcggaccttgtttcagcgcgcccggaca
agctcaccatgtgtaatcttctttgatgaggtggatgctttgacaggaaggcgtggcaga
gaaggtgatcatttggttgttggtggtcttttgaaccagtttctcactgaactgcacggt
ggagatagacgtgacgtttatgtcatcggagctacgaacaggctcgatgtgattgatggt
gctttcttgagaccaggtaggtttgcgaatcttgtgtacgtacccctccctaacgcgtat
gagcgtgtttcgatcctaaaatctattgcaaagaagagacccatagatcctagtgttgat
ctggatgccattgcaaccaagtactgtgaagattttagcggagctgatctcgctaacctg
atggacaaagctatacacgtggcagtgaaggagaagatccagtccagtaagtcgtctgaa
gatggcgatatggatttaagtgattgcaccatcaagatgactcatttcaagcaagccttg
tccttagtcacaccatctgtcaccaaacagcaaataaaacactacgaggaacaacgggat
agacatcatagactacaaagcagcaccaacatggaccaaatcaacgtaggaccatctttt
accttcgagtga
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