Brassica napus (rape): 106437826
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Entry
106437826 CDS
T04128
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106437826
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106437826
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106437826
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106437826
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
106437826
NCBI-ProteinID:
XP_013734269
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All DBs
Position
A3:8298251..8301348
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AA seq
425 aa
AA seq
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MLFTRGISRISSKFLRNRSFSQSLLASHRLLAIIPELGHSCSDSTTTHKGYVCRGSTYSF
KSPLFGGFTHHHLYHQSSSVVEEELDPFSLVADELSLLSNKLRAMVVAEVPKLASAAEYF
FKRGVEGKQFRPTILLLMATALNVRVPEALAAESADVVSSELRVRQRGIAEITEMIHVAS
LLHDDVLDDADTRRGVGSLNFVMGNKISVLAGDFLLSRACVALAALKNTEVVSLLATVVE
HLVTGETMQMTSTTDQRHSMDYYMQKTYYKTASLISNSCKAVALLAGQSAEVAMLAFEYG
KNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRNVVGQLEKD
PTNVDIALEYLGKSNGIQRTRELAMEHANLAAAAIGSLPETDDEDVKRSRRALIDLTHRV
ITRNK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttattcacgaggggtatttctcggatctcttccaagtttctgagaaaccgcagcttc
tctcagtcacttctcgcctctcaccgcctcctcgcaatcattcccgagctgggtcactct
tgttccgactctactactacacacaagggttacgtttgcagaggatctacttattcattc
aaatctcctctttttggtggttttacacatcatcatctctatcaccagagcagctcagtt
gttgaggaggagcttgacccgttttcgcttgtagctgatgagttgtcacttcttagtaat
aagttgagggcgatggtagttgccgaggttccgaagcttgcttctgcggctgaatacttc
ttcaaaaggggtgtggaaggcaaacagtttcgtccaactattttgctgttgatggcgact
gctctgaatgtacgtgtaccagaagcattggctgctgaatcagcagatgtagtctcatca
gagttacgtgtaaggcaacggggtattgctgaaatcaccgagatgatacatgttgcaagc
ctactgcatgatgatgtcttagatgatgctgatacaaggcgtggtgttggttccttaaac
tttgtaatgggtaacaagatatcggtattagcaggagactttttgctttctcgggcttgt
gtggctcttgctgctcttaaaaacacagaggttgtatcgttgcttgcaactgttgtagaa
catcttgttaccggtgaaaccatgcaaatgactagcacaactgatcagcgtcatagtatg
gactactatatgcagaagacgtattataagacggcatcactaatctcaaacagctgcaaa
gcagttgcattactcgctgggcaatcagcagaagttgccatgttagcttttgaatacggg
aagaatctgggcttggcgttccaattgatagacgacgttcttgacttcaccggcacatct
gcgtctctcgggaagggatccttatcagatatccgacatgggatcataacagctccaatc
ctctttgccatggaggagtttcctcaactacgcaatgttgttggtcaacttgaaaaagat
ccaacgaacgttgacattgctttagagtatcttgggaagagcaatgggatacaaaggaca
agagagttagctatggaacatgcgaatctcgcagcagcagcaattgggtctctacctgaa
acagacgatgaagatgtcaaaagatcgaggcgggcacttattgacttgacacatagagtc
atcaccagaaacaagtga
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