Brassica napus (rape): 106437888
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Entry
106437888 CDS
T04128
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106437888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106437888
04147 Exosome [BR:
bna04147
]
106437888
04090 CD molecules [BR:
bna04090
]
106437888
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106437888
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106437888
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106437888
CD molecules [BR:
bna04090
]
Proteins
106437888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_29
AAA_5
nSTAND1
AAA_30
AAA_15
AAA_25
APS_kinase
DUF87
Rad17
DUF4349
Motif
Other DBs
NCBI-GeneID:
106437888
NCBI-ProteinID:
XP_013734348
LinkDB
All DBs
Position
A3:8870909..8876460
Genome browser
AA seq
1337 aa
AA seq
DB search
MSQESVQIEEEIKSLEQWRWSEMQGLELLPEPSSNSNSNSRNPETELQEHPPEMENGGGT
PPPPATVEEPKKAEIRGVAFKELFRFADGLDYVLMTIGSVGAFVHGCSLPLFLRFFADLV
NSFGSNANNVDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEA
ALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFVSGFIVGFTAVWQ
LALVTIAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGESRA
SQAYSSALKTAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHLTNGGLAIA
TMFAVMIGGLGLGQSVPSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELESVTGLVE
LKNVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLL
DGHDLKTLKLKWLRQQIGLVSQEPALFATSIKENILLGRPDADQVEVEEAARVANAHSFI
IKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL
DRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGIYSKLIKMQEA
AHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTTDFSLSVEASSY
PNYRHDKLPFKDQANSFWRLAKMNSPEWKYALVGSVGSVICGSLSAFFAYVLSAVLSIYY
NPDHNYMIKQIDKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEM
AWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVL
VAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYT
ANLEPPLKRCFWKGQIAGSGYGVAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFMVL
MVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDLDTTPVPDRLRGEVELKHI
DFSYPSRPDIQVFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVLIDGKD
IRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHECATEAEIIQAATLASAHKFISALP
DGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQAC
SGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGIYARMIQLQRFTHTQ
VIGMTSGSSSRVKDDDA
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaatctgttcagatagaagaagaaataaagtcattagaacaatggcgttgg
tccgaaatgcaaggacttgagcttctccctgaaccttcctcaaatagtaacagcaactca
agaaacccagaaacagagctccaagaacatccgccggagatggaaaacggcggtggtact
cctcctcctccggcaacagtggaggagcctaaaaaagcagagattcgtggagttgcgttc
aaagagcttttcagattcgcagatgggttagattatgtactgatgacaattggctctgtt
ggtgctttcgtccacggctgctctttgcctctgttcctcagattcttcgccgatctcgtt
aactccttcggttctaacgcgaataacgtcgacaagatgatgcaagaagttctcaagtat
gcgctttactttcttgtcgttggtgctgcaatctgggcttcctcctgggcagagatttcg
tgttggatgtggactggagagagacaaacaacgaagatgaggataaagtacttagaagct
gctttaaaccaagacattcagttcttcgacactgaggttcgaacttcagatgttgtctcc
gccattaacaccgacgctgttatggttcaagacgccatcagcgagaaattgggtaacttc
atccattacatggcgacttttgtgtcgggattcatcgtgggtttcacggcggtgtggcaa
ctagcgttggtgactatcgcggtggttccgttgatagctgtgatcggaggaatccacacc
acaactctctctaagctctctaacaagagtcaagagtctctttcacaagctggtaatatc
gtcgaacagacagtggtacagatcagggtagtaatggcttttgtcggagaatcaagagcc
tctcaagcttactcatcagctttgaagacagctcagaaactcggttacaaaacaggtttc
gctaaaggaatgggacttggcgccacttacttcgtcgtcttctgttgctacgctctcttg
ctctggtacggtggctatctcgtccgtcatcatttgaccaacggtggtctcgctatagcc
accatgttcgccgtcatgatcggtggcttggggttgggacaatcagtaccgagcatggct
gcgtttgcgaaagctaaagttgctgctgcaaagatctttagaatcattgatcacaagcca
acgatagagcgtaacagcgagtccggcgtggagctagagtctgtcacgggtcttgtcgag
cttaaaaacgttgacttttcgtacccgtcaagaccagatgttaagatccttaacgacttc
acactctctgttcccgccgggaagactatagctttggtcggaagcagtggttcgggcaaa
agcactgtcgtttcgcttatcgagcggttctacgacccaacctcaggtcaagttttacta
gacgggcacgacctgaagactctgaaacttaaatggttaaggcaacagatcggtcttgtg
agccaagaaccagccttgtttgccacttctatcaaagagaatatactcttaggccgtccc
gacgcagatcaagtcgaggtagaagaagcagctcgagtcgcaaatgctcattccttcatc
atcaaactacctgatggcttcgacacacaggttggggagagaggactgcagctttcaggt
ggacagaagcaaagaatagcgatagcaagagccatgttaaagaacccggcgatactttta
ctagatgaagccacaagcgctttggattctgaatcagagaagctagtgcaagaagctttg
gaccgtttcatgataggaaggacgactctaatcatcgctcaccgtctctccaccatccgc
aaagctgaccttgtagctgtgcttcagcaaggaagtgtctccgagattggtactcacgac
gagcttttcgccaagggagagaatggtatctactctaagcttattaaaatgcaagaggca
gctcatgaaaccgctatgaacaacgcaagaaagagtagtgctagaccgtctagtgctaga
aactcggttagctcaccgataatagctcggaactcttcttatggaaggtcaccgtactcg
cggagactctccgacttctcaactactgacttcagcctctccgtcgaagcttcttcatac
ccaaactaccgacacgataagctaccattcaaggaccaagccaactccttctggcggcta
gcgaaaatgaactctccggagtggaaatacgctctcgtcggttctgtcggctctgtcatc
tgcggctcgctcagcgccttctttgcgtatgtcctcagcgcggtcctaagcatctactac
aacccggaccacaattacatgatcaaacagattgataaatactgttacctcttgatcggt
ctctcttctgcggctctcatcttcaacacgctccagcattctttctgggacattgtgggg
gagaatctcaccaagagggtccgtgagaagatgcttaccgctgtgctcaagaacgagatg
gcttggtttgatcaagaggagaatgagagcgcgagaatctcggcgaggttggctcttgat
gctaataacgtgagatcagctataggagataggatctcggtcattgtgcagaacacagcg
ttgatgcttgttgcttgcactgctgggtttgttctgcaatggagactagcacttgtgttg
gttgcagtcttccctgttgttgttgctgcaactgtcttacagaaaatgttcatgactgga
ttctctggagaccttgaagcagcacatgccaagggaacacagctcgctggcgaagccata
gctaatgtcagaacagtcgcagctttcaattcagaggcaaagatcgttcgtctctacact
gcaaacctcgaaccaccgttgaaacgttgcttctggaaaggacaaatcgctggaagtggc
tatggtgtagctcagttctgtctctacgcatcttacgctctagggctatggtacgcgtcg
tggcttgtgaaacacggcatctcagacttctccaaaaccataagagtcttcatggttctg
atggtctcagctaatggtgcagcagagacactcacattagctcctgatttcatcaaaggt
ggtcaggctatgaggtcggttttcgaacttcttgatcgaaaaaccgagatcgaaccggat
gatctcgataccacgccggttccagaccggttacgcggcgaagtggagctgaaacacatt
gatttctcttacccttctagaccagacattcaagttttccgtgaccttagccttcgcgct
agagctggcaagactttggcccttgtcggtccgagcgggtgcggtaaaagctcagtcatc
tccctcatccagagattctacgaaccgtcctcaggccgagtcttgatagacggtaaagac
ataaggaagtacaatttgaaggccataaggaaacacatagccatagtccctcaagagcct
tgcttgttcggcacgacaatatacgaaaacatcgcatacggacacgaatgcgcgaccgaa
gcagagatcatccaagccgcgacgctagccagcgcgcacaagttcatatccgcgttgcct
gatggctacaagacttatgtcggagagagaggcgttcagctgtcgggaggacagaaacag
aggatagcgatagcacgtgccttggtgaggaaggcagagatcatgctgctcgatgaggcc
acaagtgctcttgatgcagagtcagagaggtcggtgcaagaagcattggaccaggcttgt
tctggtagaacatctattgtcgtggctcataggttgtctacaatcaggaacgcacacgtg
atcgcggtgattgatgatggtaaagttgcggaacaaggatcgcattcgcatcttctcaag
aactatcccgatggaatctacgcgaggatgatacagttgcagaggtttacgcatactcag
gtgattggtatgacgtcagggtcgagttctagggttaaggatgatgatgcttag
DBGET
integrated database retrieval system
