Brassica napus (rape): 106438413
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Entry
106438413 CDS
T04128
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
bna
Brassica napus (rape)
Pathway
bna00280
Valine, leucine and isoleucine degradation
bna00650
Butanoate metabolism
bna01100
Metabolic pathways
bna04146
Peroxisome
Module
bna_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
106438413
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106438413
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106438413
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
106438413
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
106438413
NCBI-ProteinID:
XP_013735006
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Position
A3:12071161..12073831
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AA seq
469 aa
AA seq
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MQWNGVRRAHSLWCCKTLTNNTHLHHAYVPVTTMSSLEEPLAFDKLPSMNTIDRIQRFSS
GGACRPRDDDVGMGHRWIQGRDCTTSNCCNDDDDKSFGKESFPWKRHTRKVSEGEILLRS
ISFSGRNSSSTVSGTVSKSFQEHKFHTFSNDNGISHSSNKLVRGVPKFVKVVEVGPRDGL
QNEKIIVPTSVKVELIQRLVSAGLPVVEATSFVSPKWVPQLADAKDVMDGVNALDGARLP
VLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRAVVTAAKEHSIPV
RGYVSCVVGCPVEGAVPPSKVAHVVKELYDMGCFEISLGDTIGIGTPGTVVPMLEAVMAV
VPAEKLAVHFHDTYGQALANILVSLQMGINIVDSSVAGLGGCPYAKGASGNVATEDVVYM
LNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRRVTADASKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggaatggggtgaggagagcccattctttatggtgctgcaagacactaacaaac
aacactcatttgcatcatgcttatgttccagtcaccaccatgtcgagtttggaggagcca
cttgcttttgacaagctgccaagtatgaacaccatcgacaggatccagaggttttcatcc
ggtggtgcctgtcgccccagggatgatgatgtcggcatgggtcaccgttggatccaggga
agagattgcaccacctctaactgttgcaatgatgatgatgataagagctttggtaaagag
tcattcccgtggaaaaggcatactcggaaagtatctgaaggagagattctgcttcggagt
atttctttctcaggaagaaactcctcctccacagtttctgggactgtatccaaaagtttt
caggagcataagtttcacacctttagcaatgacaatggcatctcacattcaagtaacaaa
ctggttagaggggtaccgaagtttgtgaaggttgttgaagttggtccaagggatggtctg
cagaacgagaaaattatagtacccacgtctgtaaaggtggaacttattcagagattagtt
tctgctggattgcccgttgtcgaggctacaagctttgtatcacctaaatgggttccccag
cttgcagatgcaaaggatgtaatggatggggtaaatgctctagatggggctcgattgccg
gttctgactccgaatctaaaaggctttgaagcggctgtatctgcaggtgccaaggaagtt
gcaatctttgcatcggcttctgagtcattctccttgtcaaatatcaactgtaccattgaa
gagagtctcttgagatatcgtgctgttgtcaccgctgcaaaggagcattccattcctgtc
cgtgggtatgtatcttgcgttgtcgggtgtccagtagagggggcggttccaccctcaaaa
gtggcgcatgttgtaaaagagctctatgacatgggctgctttgagatttctcttggtgat
acaataggaatcggcactcccggtactgtggttccgatgcttgaagctgtgatggcagtt
gtgccagcagaaaagctggctgttcatttccacgatacctacgggcaagctcttgcaaac
attttggtgtctctccaaatgggaataaacatagtagactcatcagtcgctggattaggc
ggctgcccatatgcaaaaggagcttcaggaaacgtagctacagaagatgtggtttacatg
ttgaacggtttaggcgtccaaaccaatgtggatttgggaaagcttatagctgctggagat
ttcatcagcaagcatcttggccgtccaaacggttccaaggctgccgttgccctcaaccgt
cgggtcacagctgatgcctccaagatttga
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