Brassica napus (rape): 106438479
Help
Entry
106438479 CDS
T04128
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
bna
Brassica napus (rape)
Pathway
bna03430
Mismatch repair
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106438479
03460 Fanconi anemia pathway
106438479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106438479
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106438479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106438479
NCBI-ProteinID:
XP_013735100
UniProt:
A0A816VKT4
LinkDB
All DBs
Position
A3:complement(12871839..12875783)
Genome browser
AA seq
749 aa
AA seq
DB search
MTDCSPLAVAMEEEESTAMSMDVEESPSTSIAPRDPPKIQRLEESVVNRIAAGEVIQRPV
SAVKELVENSLDADSTSISVTVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLSKYE
DLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGHRVSYRDGVMEHEPKACAAVKGTQ
IMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVVS
SSRLDSIRSVYGVSVAKSLIKVEVSSGESSGCAFDMEGFVSNSNYVAKKTILVLFINDRL
VECSALKRAIEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIMIEMI
QSEVELKLRNTNDTRTFQEQKVEYIQSTLKSSRSDTPVSPLPSGQKTPKVPVHKMVRTDS
SDPAGRLHAFLQPKPHNLPDTVSSLSAVRSSIRQRRNPKETADLSSVQELLSGVDGCCHP
GLLETVRNCTYVGMADDVFALVQYQTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDP
APLSELILLALQEEDLDPENNEKDHLKERIAEMNTELLMEKVEMLEEYFSVFIDSDGNLS
RLPVILDQYTPDMDRVPEFLLCLGNDVEWEDEKACFQGVSAAIGNFYAMHPPLLPNPSGD
GVRFYYTKTSEKSSQENPALGGNVEMESVLDQDLLSDAETAWAQREWSIQHVLFPSMRLF
LKPPASMASNGTFVKVASLEKLYKIFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacggactgttcgcctcttgcggtggcgatggaagaggaagagtcaacagccatgtcg
atggatgtagaagagtctccgtcgacgtcaattgcaccgagagacccgccgaagatacaa
cggctagaagagtcagtggtaaaccgtatcgcagcgggtgaagtaatccagcgtccagtt
tcggcggttaaggagctcgtcgagaatagcctcgacgccgactcaacttccataagcgtc
actgttaaggacggtggcttgaagctaattcaagtctcggacgatggccacggcattaga
cgtgaagacttgccgattctatgcgagaggcatacgacgtcgaagctgagcaagtatgaa
gatttgttctctcttagttcgatgggttttagaggagaggcgcttgctagtatgacttat
gttgctcatgttactgtcaccactatcaccaaaggccagattcatggtcacagagtgtct
tacagagatggtgtgatggagcatgagccaaaggcgtgtgcggctgtcaaaggaacgcag
ataatggtggagaatttgttctataatatgattgctagaaggaagacacttcagaactct
gctgatgattatggaaaaatagttgatttgctgagccggatggccattcatcacaataac
gttagcttctcttgtcgaaagcatggagctgtcaaggctgatgttcactctgtcgtgtcg
tcttcaaggcttgattctatcagatcagtttacggtgtgtcagttgcgaaaagcttgatt
aaagtagaagtctcctctggtgaatcctccggttgtgcttttgatatggaaggttttgtg
tccaattcgaattatgttgctaagaagaccattttggtgcttttcattaatgataggttg
gtggaatgttcagctttaaaaagagccattgagattgtttatgctgcaacattaccaaaa
gcatcgaaaccttttgtctacatgtcgatcaatttgccacgggagcatgttgatatcaat
attcacccaacaaaaaaagaggtaagccttttaaaccaggaaatcatgatcgagatgata
cagtcagaggttgaactgaaactgaggaacacaaatgatactaggacgtttcaagagcag
aaagtggaatacattcaatctacgttgaaatcctcgagaagtgatactccagtttctccg
ctgccttctggacaaaaaacaccgaaagttcctgtgcataaaatggtgagaacggattca
tctgatccagctggaaggctacatgcgtttttgcaacctaagccccataatctacctgac
acggtttctagcttgagtgcagtaaggtcttctataagacaaagaagaaacccaaaggaa
acggctgatctttctagtgtccaggaacttctttctggagttgacggttgctgccatcca
ggtttgctggagactgttaggaattgcacatatgttggaatggcagatgatgttttcgca
ttagttcagtatcaaacacatctatatctagcaaatgttgtgaacctcagcaaagagctc
atgtatcagcaaactcttcgtcgttttgctcattttaatgcaatacagcttagcgatcca
gcccctctgtctgagttgatattgttggctctgcaagaggaggatctagatcctgaaaat
aacgaaaaagatcatctgaaagaaagaatcgctgaaatgaatacagaactccttatggaa
aaggtagagatgttagaggagtatttcagcgtgttcattgattccgatgggaatttgtca
cggcttcctgtcatactcgaccagtatacacctgacatggatcgtgttcctgagttttta
ctatgcttgggaaatgatgttgaatgggaagatgagaaggcttgctttcaaggagtttct
gcagctattgggaatttttacgccatgcatcctcctcttttgccaaatccatctggtgac
ggtgttcggttttattatactaagacaagtgagaagagctctcaggagaatccagcttta
gggggtaacgtcgagatggagtcagttcttgaccaagaccttctctcagatgctgaaacc
gcatgggcgcaacgtgaatggtcaatccaacatgtgctgtttccgtctatgagattgttc
ttaaagccaccagcctccatggcttcaaatgggacttttgttaaggtagcatcccttgaa
aagctgtacaagatcttcgaacggtgctaa
DBGET
integrated database retrieval system