Brassica napus (rape): 106438741
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Entry
106438741 CDS
T04128
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106438741
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Other 90S particles
106438741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Lar_N
TFIIF_alpha
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
106438741
NCBI-ProteinID:
XP_013735457
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Position
A3:complement(13858016..13860662)
Genome browser
AA seq
490 aa
AA seq
DB search
MKHPKGGGFKRGGKKGSTDADPFFEQETKKRRKVSYDDEDIESIDSDAEENGFHGEDRKG
AAEEEEDEFADETAGEKRKRLAEALLLRTREAQRRQREERDDDDEDDEDDDIVKTLMKKQ
QEDSGRVRRAIASSVQEPLSSDEFSIIVKHRKSVVSVALSDDDTRGFSASKDGTILHWDV
SSGKSDKYKWPSDEVLKSHGMKVREPRSKKHSRESLALAVSSDGRYLATGGVDRHVHIWD
VRTREHVQAFPGHRNTVSCLCFRHGTAELYSGSFDRSVKAWNVEDKAFVQDSFGHQDEIL
AIDALRKERALTVGRDRTMLLHKMPETSRTIYRAPASSLESCCFISDTEYLSGSDNGTVA
LWGMLKKKPVFLLKNAHSIVADGTTTNENGDHDYVNSSTTNSWVSSVAVCRGSDLAASGA
GSGFVHLMAVEAGAIRPLFKLPLTGFVNSMAFAKSGKFLIAGVGQETRFGRWGCIKSAQN
GVAIHPLRLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacccgaaaggtggaggctttaagagaggcggcaagaagggctcgaccgatgcg
gatcccttcttcgagcaagagacgaagaaacggaggaaagtcagttacgacgacgaagac
atcgagtctattgactccgacgccgaagaaaacggctttcacggcgaagataggaaagga
gctgcggaggaggaagaggatgagtttgcagacgagacggcgggagagaagcggaagagg
ttagctgaggcgttgctgttgcgaacgagggaagctcagaggaggcagcgtgaagaacgt
gatgatgatgatgaagacgatgaggatgatgatattgtcaagacattgatgaagaagcag
caggaggatagtggtagggttcgaagagccattgcatccagtgttcaggagccactgagt
agtgatgagtttagcattattgtcaagcaccgaaagtctgttgtctccgttgctctctct
gatgacgacactagaggattctcagcttccaaagacggtactattctccattgggatgtg
tcttctggtaaaagcgacaaatacaaatggccaagtgatgaagttctgaagtctcacggg
atgaaagtgagggagcctcggagtaaaaaacacagtagagagtctcttgccttagccgtt
agctctgacggtcgttatttggcgactggtggagttgataggcatgttcatatatgggac
gttcgtaccagagaacatgttcaggcctttccaggtcacaggaacactgtttcttgccta
tgtttcagacatggaacagcggagctctactctggttcttttgatcggagtgtcaaggcg
tggaatgtggaagataaagcttttgtgcaagacagttttggacaccaggatgagatccta
gccattgatgcgcttaggaaggagcgtgcacttactgttggaagagataggaccatgcta
ttacacaagatgcctgagacgagccgtacgatttaccgtgcacctgcatcgtctcttgag
agctgctgtttcatcagtgacactgagtacctgtctggttcggacaacggaactgttgcg
ctttggggcatgttgaaaaagaagccggtgtttctcctcaagaatgcacattccattgta
gctgatggaaccaccactaatgaaaatggtgatcatgattatgtcaactcttccacaacg
aattcttgggtcagttcagttgctgtgtgcagaggtagtgaccttgctgcatctggagct
ggtagtggttttgtgcatttgatggctgttgaagcaggtgccattcgacctttattcaag
cttccactgactggatttgtgaactctatggcttttgcaaaatccggtaaatttctgatt
gctggtgttggacaggagacgagatttggaaggtggggatgcataaagtctgcgcaaaat
ggtgtggcaatacatcccttaaggctgtcataa
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