Brassica napus (rape): 106438895
Help
Entry
106438895 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106438895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106438895
03009 Ribosome biogenesis [BR:
bna03009
]
106438895
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106438895
Spliceosome [BR:
bna03041
]
Complex A
U1 snRNP components
U1 related factors
106438895
Complex B
106438895
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106438895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106438895
NCBI-ProteinID:
XP_013735638
LinkDB
All DBs
Position
A3:14936367..14940144
Genome browser
AA seq
636 aa
AA seq
DB search
MAATAPSAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPQPPSNLPVSSSA
SVQVPQASAVPNGSSYAPAKGGDDKYSRATGDGGPRRSRFSEINDRSGAPYLNGAANGLV
NSLPPSSAPVSDISPEAYCRRHEITVSGGQVPAPLMSFETTGFPPELLREVLNAGFSAPT
PIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLLPGFMHLQRVRNDSRMGPTILVLSPTREL
ATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL
RQVSYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ
VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN
LTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVINYDFPNG
VEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGADQRVPPQIREMAARGGGG
MNKFSRWGPSSGGRGGSSGYGGRGGGSGYGGRGSDSGYGGRGGFGSRDSGMGSRSSNGWG
RERERSRSPERFNRVPPPSSTGSPPRSFHEAMMKHR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaccgctccttccgcagtccgttatgctcccgaggatcattctcttcccaag
ccgtggaagggacttgttgatgatcgaactggatacttgtacttttggaatcccgagacc
aacgttactcaatacgagcgacctcaacctccttccaacttacctgtaagctcctccgcc
tccgttcaggttcctcaagcctctgccgtaccaaatggtagtagctatgctcctgccaag
ggtggtgatgataagtactctagagccaccggtgacggtgggcctaggcgctcgaggttt
agtgagattaatgacaggagtggagcgccgtatttgaatggggctgccaatggacttgtg
aactctcttcctccttcatcagctccagttagtgatatttctccggaggcctattgccgc
cgtcatgaaattaccgtcagtgggggccaagtaccagcacctctaatgtcctttgaaact
actggttttcctcctgagcttctgcgcgaggtactcaatgcaggtttctctgctccaact
ccaattcaagctcagtcgtggccaattgcgatgcaaggtagggacatagttgccattgct
aaaactggctcgggaaaaactttgggttacttacttcctggatttatgcatcttcaacgc
gtccggaatgattcgcgaatggggccaacaatcttggtactgtctccaaccagggagctt
gccacacaaatccaagacgaggctgttaaatttgggaggtcgtcaagaatttcatgcaca
tgcttgtatggtggtgcaccgaagggtccccagctgagggatttggaaagaggagctgat
atcgtggtggcaactcctggacgattgaatgacatccttgagatgaggagaattagtctg
cgtcaagtatcttatcttgtgctagatgaggcagatagaatgttggacatgggtttcgaa
ccgcaaataaggaagattgtgaaagagattcctactaagcgccaaacacttatgtacaca
gctacatggccaaagggagtcaggaagattgcagcggacttgcttgttaaccctgctcag
gtcaacattggtaacgtcgacgagcttgtggctaacaagtcgatcacacagcacattgaa
gtggtagcaccaatggagaaacagaggaggttagagcagatattgaggtctcaggaacca
ggctcgaaggtgataatattctgctcaaccaaaaggatgtgcgaccagctaactcgcaat
ctgacccgccaatttggagctgctgccatacatggagacaagtcacagcctgagagagac
aatgttctgaatcaattccgcagtggcaggactccggttcttgttgcaactgatgttgct
gctcgtgggctggacgttaaggacatcagggcggtcataaactatgatttccccaacgga
gtggaagactatgtgcatagaatcggaagaacaggtagagctggagcgactggtcaggca
ttcacgttcttcggcgatcaagactcgaaacatgcttcggatctgatcaagatcttggaa
ggagcagaccagcgagttcctcctcagatccgcgaaatggctgcacgtggtggcggtgga
atgaacaaattcagccgttggggtccatcttccggaggtcgagggggcagctctggttat
ggtggcagaggtggcggctctggttatggtggcagaggtagcgactctggttatggtggc
agaggtggctttggttcacgtgacagtggaatgggaagtagaagcagcaatggatgggga
agagagcgtgaaaggagtcgtagcccggagagattcaacagagttccacctccgtcttct
actggatctcctcctcgcagcttccatgaagccatgatgaaacaccgatga
DBGET
integrated database retrieval system
