Brassica napus (rape): 106438982
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Entry
106438982 CDS
T04128
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106438982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106438982
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
106438982
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
PRIMA1
Motif
Other DBs
NCBI-GeneID:
106438982
NCBI-ProteinID:
XP_013735769
UniProt:
A0A816VZB3
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Position
A3:15370922..15374033
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AA seq
389 aa
AA seq
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MLFQVGGDGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFYAALM
LILEGHSLRTTDASFAESLYGLRRKSARLRLRKGSGEEEVQHSGLEKRQRILSVVFLVVL
PYFKSKLHAIYNKEREARLRESLWGMEDQGFDEADFFTGEEPVVSRGDSGNQELSVRVQL
ATKIKKFIAVCYPWIHASSEGLSFSYQLLYLLDATRFYSLGLQALGIQVCRATGQELMDT
SSRISKIRNHERERLRGPPWLKTVQGALLTCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA
EERLTAPTVYPPPPPPPAPKVAKEGIPLPPDSSLCALCLQKRANPSVVTVSGFVFCYSCV
FKYVTKYKRCPVTLIPASVDQIRRLFHDT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcaggtgggaggcgatggcacacgccctaccttcttcgagatggctgcggct
cagcagcttccagctagcctccgcgccgctctcacatactcactcggcgtttttgcattg
agaagatcgtttcttcataaaatcttagactacgaggatgagttctatgctgctctgatg
cttatcctcgaaggacatagcttacgaaccacagatgcttcgtttgctgaatcattgtat
ggtttgaggaggaagtcagcgagattgagattgaggaaaggttccggagaagaagaagtt
caacattctggtttagagaaacgccagaggatcctttctgttgtgtttctggttgtgtta
ccttatttcaaatcgaagcttcatgcgatatataacaaggagagggaagcgaggctaagg
gaaagtttatggggaatggaggatcaagggtttgatgaagctgacttcttcacaggagag
gaaccagttgtttcgagaggggatagtgggaatcaagagctttctgttcgagtgcagtta
gctacaaagattaaaaagtttatagctgtgtgctatccttggatacatgcatctagtgaa
ggattatcattcagttaccagctcttatatctactggacgctactagattctattctctc
ggccttcaagctcttgggatccaagtttgtcgagctacagggcaagaactgatggatacg
tcttcaagaatttcaaagatacggaaccatgaacgtgagagacttcgtggtcctccatgg
ttaaaaacagtgcaaggggctcttcttacctgttcatatgcggttctcgactacgcccaa
accggtttgattgcagccgtttttatctttaaaatgatggaatggtggtatcagtctgct
gaagaaagattgacagctccaactgtgtaccctccacctccacctcctccagccccaaag
gtggctaaagaaggaatccctctacctccagacagttctctctgcgcgttatgcttgcaa
aaacgtgcaaacccgtcagttgtcacagtctctggatttgttttctgctattcctgcgta
tttaagtatgttacaaagtacaagcgatgtccagtgacattgattccggcaagcgtggat
cagataaggaggctgtttcacgacacttag
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