Brassica napus (rape): 106438997
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Entry
106438997 CDS
T04128
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106438997
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
106438997
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106438997
Prokaryotic type
106438997
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF674
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
106438997
NCBI-ProteinID:
XP_048606052
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All DBs
Position
C3:complement(23665594..23669845)
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AA seq
697 aa
AA seq
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MKAMKLNKTVSSCLLRLLKPYSSSFHWTSTMAASAKTSEGMKTVDESDVGISCFISQLPG
FRGILKQRYADFIVNEVDMDGNVVRLTSLDVSPEMDVKEEDKRRSSDDVPQSYASAIESF
RSLCSASDAERMETLVNQVTSGAEDEISPVVLDPSSDKSKRTAIHNFVKEKFKFLVTDTV
DGPDPSSKCIRVRVNSGNAGGKRSKKRKERGDKPFDSRGSEHWPADVGKFLKFHLYKENK
DTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQSSKLAALNKRLFGIKVGD
FCLVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVP
THHVGAALLKGEWKEAVDMILDPRESERNVVNEAREYYKETGDIDGTLRQLPRYLVAERA
ILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLVST
KVDDAKRIVGSLNSEQKENSEEALDCDQLDDTAVVDLPGERSDLVKVVGIEDVEAGTYPT
SDIVLPLPGSRVIYPSNDIAEIFHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKP
IDFEWELLTYTDSNKPLAETDLDRITMEKPVDKVGSAEETESDSNQPESCETDLKDSEQT
QLALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatgaaactaaacaaaactgtttcgtcttgtttgttgcgtctgctaaaaccc
tactcctcgagctttcactggacttcgacaatggcggcgtcagctaaaacctccgagggt
atgaagaccgtagatgaatccgacgtgggcatctcctgtttcatctcccagctccctggc
ttccgcgggattctcaaacaaagatacgcagactttattgtaaacgaagtggatatggat
ggcaatgttgttcgtttgacatcactggatgtctctcctgagatggatgtgaaggaggaa
gataaaaggagaagttcagatgatgtaccacaaagctatgcttctgcaattgaatccttc
agatctctttgcagtgcctctgatgcagagcgtatggaaactttggttaaccaagtcact
tcaggagctgaagatgagatctcgccggttgttcttgatccaagttccgacaagtccaag
agaacggctatccacaactttgttaaagagaaattcaagtttctagtgaccgacactgta
gatggtccagatcctagttcgaaatgcatccgtgtgcgagtgaattcaggaaacgctgga
ggtaaaagatcgaaaaagcgcaaggagagaggtgataagccgtttgatagcagaggttca
gagcattggccagcggatgttggcaagtttctcaagttccatctctacaaggagaacaaa
gatacacaagaggccttgggattgatcggaaagatgcttggcgttcagccaaagtccttt
ggattctctggaacaaaagataagagatcagtttcaactcaacgtgtaactgtgttcaaa
cagcaatctagcaaattggctgcgcttaacaagagattgtttgggatcaaagttggtgac
ttctgccttgtcaaagagggccttctccttgggcagctgatgggaaacagatttacaatc
acattaagaggagtggttgcggattctgaagagactatcaaaaagtctgcagagtccttg
ggcaaagatggcttcatcaactactttggcttgcagcgttttggaagtggttcagtacca
acccaccatgttggagccgcactactgaaaggagagtggaaagaagctgtagacatgatt
cttgatccaagagaaagtgaaaggaatgtagtaaacgaggcccgtgaatattacaaagaa
actggtgacattgacgggactctaaggcagctaccgcgatacctcgttgctgaaagagcc
attctgcagtgtctgaagaaatgtcctgggaactacctgcaggctctgaaaggcataccc
agaactttgagaatgatgtatgtacatagttatcagagctacttatggaacaatgcagca
agtctgcgcgtgcaaaaatacgggaccaaccaagttgtgttgggggacttggtgagtaca
aaggtagatgatgccaagagaatcgttggcagtttgaactctgaacagaaggaaaacagc
gaggaggcattggattgtgaccagttagatgatactgctgttgttgatcttccaggagaa
aggagtgacctcgttaaggttgtaggtatagaagacgtggaagctggaacttacccgacc
agtgacatcgtcctccctctacctggttccagagttatttatccatccaatgacattgct
gaaatttttcatgatttggcaaagaaggacggtatcagcttaacagaaagcattcacggt
gtaaaggaattctcaataactagcatgactggtggttatagacgtgttttccagaagcca
atcgactttgaatgggagttactgacttacactgacagcaataaaccattggcagagaca
gacctggacaggataaccatggaaaagcctgtggataaagtaggatctgctgaagaaact
gaatccgatagcaaccaaccagaatcatgtgaaaccgatttgaaagattccgagcagaca
cagttggctctcaaaatggctctcactcttccatcttcttgttatgcaacaatggcaatc
agagagctcttgaagacgtcaacttctgttgcatatcacaagacactaaactag
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