Brassica napus (rape): 106439103
Help
Entry
106439103 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106439103
00071 Fatty acid degradation
106439103
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106439103
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106439103
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106439103
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106439103
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106439103
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106439103
Exosomal proteins of breast cancer cells
106439103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
106439103
NCBI-ProteinID:
XP_013735920
LinkDB
All DBs
Position
A3:complement(15737304..15742559)
Genome browser
AA seq
696 aa
AA seq
DB search
MDSTTAARRRINAIHSHLVTSSRSSPLLLSSNPTAGEFCLDNGYSVVLPEKLSTGKWNVY
RSARSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEV
GTARTALGSGLVHHGITTGSSVGIYFINRPEWLIVDQACASYSYVSVPLYDTLGPDAVKF
IVNHANVQAIFCVAETLNSLLSGLSEMPSVRLVVVVGGLNESLPSLPPSAGVKVVSYSVL
LNQGRSNPQPFSPPKPDDVATLCYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFFSSDI
YISYLPLAHIYERANQILAVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYD
GITNAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTSG
ASPLSPEVLEFLKICFGGRVSEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLVDV
PEMNYTSADEPHPRGEICVRGPIIFRGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYAKCRFVGQCFIYGDSFNSSLVAVVSVDPDVLKSW
ATSEGIKGDLRELCNNPRVKAAVLSDMDAVGRESQLRGFEFAKAVTLVLEPFTLENGLLT
PTFKIKRPQAKEYFAEAITNMYKELAASDPTANKAL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggattctaccaccgccgcacgccgccgcataaacgctatccactcccatctcgtcacg
tcttcccgctcctcccctctcctcctcagctccaatcccaccgccggcgagttctgtctc
gataatggatacagcgtcgtgcttccggagaagctgagcactggcaagtggaacgtctac
agatctgctcgatctccgttcaagctcgttagtaggttccctgatcatcctgacatcgcc
actctccatgacaactttgagcatgctgttcatgactttcgggattacaagtacttagga
actcgcgttcgagtcgacggaactgttggagactacaaatggatgacatatggagaagtt
ggtacagcaagaactgctttaggttctggtttagttcaccatggaatcaccacgggatct
tctgttggaatttactttatcaaccgcccagagtggctcattgtcgatcaagcttgtgct
tcttattcgtatgtgtctgttcctttgtatgatactcttggtcctgatgctgtaaagttt
atcgtcaatcatgcaaatgtgcaagccatattctgtgtggctgagacgttaaactcctta
cttagcggcttgtctgagatgccaagcgtacgcctggtggtggttgttggagggttgaat
gaatctttgccttcgcttcccccatccgcaggagttaaagttgtctcatattcggtctta
ctgaatcagggccgtagtaaccctcagccgttttctccaccaaagcctgatgatgtggca
accttatgctatacaagcggaacaactgggaccccaaagggagtcgtattgactcatgca
aacttgattgcaaatgttgctggatccagttttagtgtgaaatttttctcttcagatatt
tacatttcatatcttccactggcacacatttacgaacgagcaaatcagatcctagcagtg
tacttcggagttgctgttggtttctaccaaggggacaatatgaaactactggatgatctg
gctgctttgagacctactgtattcagcagcgtcccccgattatacaatagaatatatgat
ggaattactaatgcagtaaaaacctcgggtgggctgaaagagaggctcttcaatgctgct
tataatgcaaagaagcaggctctcttgaatggaaaaagtgcgtctcccatatgggacagg
ttggtatttaataagataaaagacagacttggaggacgagttcgttttatgacgtctggg
gcttcacctttgtctcctgaagtgttggagtttttgaagatatgctttggaggaagggta
tcagaaggatatggaatgactgaaacatcttgtgttataagtggaatggacgagggtgat
aacctcactggacatgttggctctcctaatccagcttgtgaagtaaagcttgtggatgtc
ccggaaatgaactatacatcagcggatgaaccacatcctcgtggcgagatatgtgttagg
ggtcccatcatcttcagaggctattacaaggatgaagttcaaacgagagaggtgattgat
gaagatggatggcttcacactggagatataggtctttggcttccgggaggacgtctcaaa
attattgacaggaaaaagaatatcttcaagttggcgcaaggggagtatatagctccagag
aaaatagaaaacgtctatgccaaatgcagatttgtgggccaatgcttcatatatggtgat
agctttaattcatcattggtggctgttgtatcggttgatccagatgtgcttaaaagctgg
gctacttcagaaggcattaagggagatctgagagagttgtgcaataacccgagagtgaaa
gcagcagtattatcagacatggacgctgttgggagagaatctcagttgagaggctttgag
tttgcaaaagctgtaacattggtgctggagccattcacgctagaaaatggcttgttgaca
ccaacattcaagattaagagaccacaagcaaaggaatacttcgcagaagcaataacaaac
atgtacaaggagcttgctgcttctgatcccaccgctaataaagctttgtga
DBGET
integrated database retrieval system
