Brassica napus (rape): 106439157
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Entry
106439157 CDS
T04128
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106439157
09122 Translation
03013 Nucleocytoplasmic transport
106439157
03015 mRNA surveillance pathway
106439157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106439157
03041 Spliceosome [BR:
bna03041
]
106439157
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106439157
Spliceosome [BR:
bna03041
]
Complex C
Other components
EJC/TREX
106439157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
106439157
NCBI-ProteinID:
XP_013735997
UniProt:
A0ABQ8B7P7
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Position
C1:complement(283275..285888)
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AA seq
529 aa
AA seq
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MSSSPFPILDNRPIDKWKVTELKEELKRRRLTTQGLKFDLVRRLDDALRAEQEESANQQP
DVTYVPGGNLAPDPTQTTPVPLVGTTPEPEVNAVVVTQEASNERIVEMENKETFSGLDSK
AQPTEVSAIHNQVSEVIPVTGFEVKSDCISSNNEKIELKGNEIADNVKLEHSLSKSQEPS
TAIGDSHPKISAGGGDDADMTKGNNNSVDSEKLNLDRSSGDESMDDEPETNQNESVTPLE
VVDKSEQNDLLPDKADNMDGEKGEAPDNKSHPLVASDKRKLPVNDQEAVGNNVPAKRQRR
WNSGNIKVPEAQATNSVAPSTTPSSAGLKRDFSRSDSSVSEDGPKERVVPPSPKEPTNSL
KIDRFLRPFTLKAVQELLGKTGNVTSFWMDTIKTHCYVSYGSVEEAAATREAVYNLQWPP
NGGRLLTAEFVGPEEVKAKLEAPPPQQPKDQAPSQPPPTALPPPPPLAKAPPVKERHALP
PPPPLVPEEQEAPIVTLDDLFKKTKAIPRIYYLPLSEEQVAAKLAANNK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcaccttttccaatcctggacaaccgcccaatcgacaagtggaaggttacc
gagttgaaggaagagctcaaaagacggagactaactacacaaggcttgaagtttgatttg
gttaggcgtctcgatgatgcccttcgtgctgagcaggaagagtcagccaatcagcagcct
gatgttacttatgtacctggaggcaaccttgcaccagatccaacgcagaccactcctgtt
cctctagttgggaccactccagaaccagaggttaacgctgtagtagttacccaagaggca
tctaatgagcggattgttgagatggagaataaggagacgtttagcgggttggattctaag
gcccaacctacagaggtatctgctatccacaaccaggtatctgaggtcatccccgttaca
gggtttgaggtaaaatctgattgtatttcatcaaataatgaaaaaatagaactaaagggt
aacgaaattgctgataatgtcaaattagaacatagtcttagtaagtcccaagagccatca
acagccattggcgattcgcatccaaagatatctgccgggggtggagatgatgcagatatg
accaaaggaaataataatagtgtcgactctgaaaagttgaatttagatagaagttctggt
gatgagtctatggatgatgagcctgagacgaaccaaaatgaatcggttacgcctcttgaa
gtggtggataagagtgagcaaaatgacttgcttcctgataaggctgataatatggatggt
gagaaaggagaagcccctgataacaaaagccatccactggtggcttctgacaaaagaaag
cttcctgttaatgatcaagaagctgttggaaacaatgtgcctgcaaagaggcaacgccga
tggaactccgggaatattaaagttcctgaagcacaggccactaatagcgtggcaccctct
acaacaccgagctcagctggtctgaagcgtgacttctcccgatctgactcttcggttagt
gaggatggacccaaggaacgcgtggttcctccatctccaaaggagcccaccaattccctc
aagattgatcgtttccttaggccgttcacactgaaagctgttcaagagcttttgggtaaa
actggaaatgtcactagtttctggatggacaccattaagacccactgctatgtatcatat
ggttcagttgaagaagctgcagcaacaagagaagcagtgtataacctccaatggccacct
aatgggggccgtcttctgacagctgaatttgttggaccagaggaagtgaaggcaaaacta
gaagctcctcctcctcagcagccaaaggatcaggctccttcgcagccacctccaactgct
ctgccaccaccaccgcctttggccaaagcacctccagtcaaagaacgccatgcccttcct
cctcctcctcctctagtcccggaggaacaagaggctcccatagtcactctggatgatctt
ttcaagaagacaaaagcaatccccaggatatactacttgcccttgtcagaggaacaagtt
gcagctaaacttgcagctaataacaagtga
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