Brassica napus (rape): 106439200
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Entry
106439200 CDS
T04128
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106439200
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
106439200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Peptidase_S77
Motif
Other DBs
NCBI-GeneID:
106439200
NCBI-ProteinID:
XP_048632302
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All DBs
Position
A3:complement(16358867..16363007)
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AA seq
604 aa
AA seq
DB search
MVWCNHCAKNVPGVRPYDGALACDLCGRILENFNFSTEVTFVKNAAGQSQASGNVVRSVQ
SGVSSSRERRIRLARDEFMNLRDGLGLGDERDDLIDMATRFFTMAVEQNFTKGRRTELVQ
CSCLYLTCREKNIPFLLIDFSSYLRVSVYELGAVYLQLCEMLYLTENKNYEKLVDPSIYI
PRFANVLLKGTYNKKVLKTARNIIASMKRDWIQTGRKPSGICGAALYTAALANGIKCSKT
DIVGIVHICEATLTKRLNEFVDTEAGSLNVKELKKREQEMQKRPFATNQTSNKETVHCKH
QDRKPVNYGLCEECYSDFISVSGGLVGGSDPPAFQRAEKDRMEKEKTAREENEGGISSLN
HDEQQNSKREPVYSSVSKSAKPCSEKGEGEKEEDDGEVSDESGNFSDVSDTEVDCYINNE
EERRYKKVVWEEMNKEYIQEQADKQAALKAANDALNASSSNLPEHARKLVEASKAAVAKS
RKEKQQKRAEEEKNAPPPATTTESVRRMLDRKRLRGLIPDDVLDDLFDPSPTEKPAKISR
TETVIEKTKEVKSNKQEDGEDEAEEDEEGYVESYDINTDFPDGEKLYEEEDEEEEEDGYD
FGLY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtaaccattgtgcgaagaacgttccgggtgtacgtccctacgatggtgca
ctggcatgtgatttatgtgggaggattttggaaaattttaacttttcaactgaagttact
ttcgttaagaatgctgctgggcagagtcaagcgtcaggtaacgtagtgagaagtgttcag
agtggggtttcaagctcacgtgaaaggagaattagactagctagagatgagtttatgaat
ttgagagatggtttgggacttggtgatgagagagatgatctgattgacatggctactcga
ttctttacaatggcagttgagcaaaatttcactaagggccggagaactgaactagtacag
tgttcctgtctctacttgacttgcagggaaaagaacatcccgtttcttcttattgatttc
tcaagctaccttcgtgttagcgtttatgagttaggtgctgtgtacttgcaactctgtgaa
atgctgtaccttactgaaaacaagaactacgaaaagcttgttgatccttcaatctatatt
cctcggttcgcaaacgtcttattgaaaggcacatataataaaaaggtcctgaaaacagct
agaaacattatagctagtatgaagagagattggatacagaccggcagaaaacctagtgga
atatgcggagcagcactttacacagctgcgcttgccaatggtatcaagtgctctaagacg
gatattgtaggaattgtgcatatatgtgaagcaactctaaccaaaaggttgaatgagttt
gtggatactgaggctggaagtttaaatgttaaggagctcaaaaagagagaacaggaaatg
cagaaaagaccttttgcaacgaaccagacgtctaacaaagagacggtgcactgtaaacat
caggatcgtaagcctgttaactatggactatgtgaggaatgttacagcgatttcataagt
gtttcaggaggacttgttggtgggtcggatcctcctgctttccagcgagcagagaaagat
agaatggaaaaagaaaaaacagctagagaagaaaacgaaggagggattagtagcctaaac
catgatgaacaacaaaattccaagagagaaccagtctactccagtgtgagcaaaagtgca
aaaccatgttcagagaaaggtgaaggagagaaagaagaggatgatggtgaagtttcagat
gaatcaggaaacttttctgacgtcagtgatacagaggtggattgctacattaacaacgag
gaggaaaggcgctataagaaggtggtatgggaagaaatgaacaaagaatatattcaggag
caagcagataagcaagctgctctcaaggcggctaatgacgctttaaacgcaagcagctct
aatttgccagaacatgcaagaaagcttgttgaggcttctaaagctgctgtagcaaaatct
agaaaggaaaagcaacaaaaacgagctgaggaagaaaagaacgcacctcccccagctaca
accacggaatctgttcgcagaatgcttgatagaaagaggcttagagggttaatccccgac
gatgttttggacgacctctttgatccatctccaactgagaaaccagccaagatttcaaga
accgagacagtcatcgaaaagacgaaggaagtgaagagcaataaacaagaggatggtgaa
gatgaagctgaagaggatgaagaaggctatgtagaatcatatgacattaacacagatttt
ccagacggtgaaaaactctatgaagaggaagatgaagaagaagaggaggatggttatgat
tttggactatattga
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