Brassica napus (rape): 106439226
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Entry
106439226 CDS
T04128
Name
(RefSeq) LIMR family protein At3g08930
KO
K14617
LMBR1 domain-containing protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
106439226
04980 Cobalamin transport and metabolism
106439226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106439226
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106439226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
106439226
NCBI-ProteinID:
XP_013736085
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Position
A3:complement(16465954..16469438)
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AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVCVIVFISSVYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKDLWLAVYIVDAILVFFVIPFAMFFYEGDQEKTMG
KRIKSALLWVVSTAVVCALVLGILYGVIGKVDFSVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWTMRTTFPEYVVALPTIVGSVLFTIFGGVGIACLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKGGAKGRAWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKAETAWAFTVLGYLAKFILGIIGLIVSIAWVAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VILAGLTFLYYIAFGWRRKKPSARFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgatcgtcgcgatcgtcgtctgcgtcatcgtcttc
atctccagcgtctacctcctcgtcaactaccagcatccagacgatgcgaaccaggcgtat
ttccccaagttcgtcgtcgtcttcggcctctccatcgccatgatctcgatcctcatgctg
ccggctgacgtggcgaatcggcacgcttgtaggcacgcgatttacaacggcgcgtgtaat
ctgacgttgcctatgaaggatctttggcttgcggtttacattgttgacgctatcctcgtg
ttctttgttatccctttcgctatgtttttctatgaaggggaccaggagaagactatgggg
aaaaggattaaaagtgccttgctttgggtggtaagcacggctgttgtttgtgctctggtg
ctcggaatcttatacggtgttattggaaaggtggatttctctgtcaggcacttggcttct
ggcacgacctctttccctacttcctggcaattttcaaataatcaaccatgtatcggtaac
accgcccgccagtgctcagcatttacagctagtgtcgcatccgagaaaacgtggaccatg
cgtactacttttccagaatacgttgttgctcttcctacaattgttggttcagttcttttc
acgatatttggtggcgttggtattgcctgcctaccattaggacttatcactgcattcatc
cggcgaccaaaggctgttatcactcgatcacaatatataaaggaagcaactgagctaggg
aaaaaggctagagaactaaagaaagcagccgatggacttcgtcaggaagaaaaaggtggt
gctaagggcagggcatggaggaaaaatgttaaagcagttgaaaaggagttgctccaattg
gaggaagatgtgaacctcttagaagaagcgtatcctcaaggagagaaggcagaaactgcc
tgggctttcactgtactaggatacttggccaagtttattcttggaatcataggattgatc
gtttctattgcatgggtggcacacatcatcatatatctacttgtcgaccctcctctttcc
ccttttcttaacgaggtttttattaagcttgatgacgtttggggtcttcttggcactgct
gcctttgctttcttctgtttctaccttctactcgctgttatcgctggggcaatgatgctg
ggtttgaagcttgtcttcatcaccattcatcccatgaaatggggagctactttaatgaac
tctttcctcttcaatgttggcctcattcttctttgttcaatcagtgtgattcaattctgc
gccactgcatttggatactacgctcaagccactgctgcccaggagatctttggccacacg
ttgcagtcactccgaggaatcaagtacctctacaagtacaacgtgttccaaatcgggttt
gttatcctggctggattgaccttcctgtactacattgctttcggatggagaagaaagaaa
cctagcgcccgtttccagctctcttcttaa
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