Brassica napus (rape): 106439289
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Entry
106439289 CDS
T04128
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106439289
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106439289
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_4
zf-MYST
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
106439289
NCBI-ProteinID:
XP_013736148
UniProt:
A0A078J903
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Position
C7:36527797..36530967
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AA seq
442 aa
AA seq
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MKTDQGAVVMLDDAASKKNTTNTRCVVFSSSDILLPSSENGVTTTKTSTQKRKRRPAGTP
DPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLRRDNNIEVKKR
VYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC
GTRGHSCDCGRVFSRVESFIEHQDNCSVRNVHHEPPPPPQTAAIITACSSRTASTASTPS
SETNYGGAVTAATPLPLEGRPIHIRSSSLTPLVLNNSSNLNLELQLLPLTPNLNPNQEYQ
QHKVKEPSLHHHHHNHDTTNLNLSIAPSSSSYHHYNNFDRIKELMASEQIMKEKAYAEEA
KREAKIQREIAENEFANAKKIRQQAQTELKRAKLLKEQSMKKISSTIMQVTCQTCKGQFQ
ATEETSLVVSYMSSANTDGEGS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatcaaggagcagtggtgatgttggatgatgctgcttccaagaagaacact
actaacacacgttgtgtggttttttcttcttctgatattttactcccttcttcagaaaat
ggggtcaccaccacaaagacatccacccaaaagaggaaaagaagacctgcaggaacacca
gatccagatgcagaagttgtgtcactatcaccaagaactcttcttgaatcagacagatac
atatgtgagatctgtaaccaagggtttcaaagagatcaaaatctccagatgcatcgaaga
cgtcacaaggttccatggaagcttctgaggagagacaacaacatagaggtgaagaaacga
gtctatgtttgccctgaacccacttgtcttcaccatgatccttgtcatgctcttggagat
cttgtcgggataaaaaaacatttcagacgaaaacacagcaaccataagcaatgggtttgt
gagaaatgctctaaaggttatgctgttcaatcagattacaaagctcatctcaaaacttgt
ggcactagaggccattcttgtgactgtggtcgcgtcttctccagggtggagagttttatt
gaacatcaagataactgttccgtacggaatgttcaccatgaaccgccgccaccgccacaa
accgccgccattatcacggcctgctcctctagaaccgcctcaactgcaagcactccatct
agcgaaacgaattacggtggtgcggttacggctgcgactcctctacctctagaaggacgt
ccaattcatatcagaagctcatctttaacgcctttagttctcaacaactcatcaaatctc
aacctcgaacttcagctccttccattgacgccaaatctaaaccctaatcaagaataccaa
caacacaaagttaaagaaccatctcttcatcatcatcatcataatcatgataccacaaac
ttaaacctctccattgctccatcatcatcatcatatcatcattacaacaactttgatcgc
ataaaagaactaatggcgagtgaacagatcatgaaggagaaagcttatgcggaggaagct
aaaagagaagcaaagatacaacgagagatagcggaaaatgagtttgcgaatgcgaagaag
ataaggcagcaagcacaaactgagcttaagagagctaagcttttaaaggaacaatctatg
aagaagataagctcaacgattatgcaagttacttgtcaaacttgtaaaggacagtttcaa
gcgacggaagagacatctcttgtggtgagttacatgtcgtcagcgaatacggacggagag
ggatcatag
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