Brassica napus (rape): 106439372
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Entry
106439372 CDS
T04128
Name
(RefSeq) RNA cytosine-C(5)-methyltransferase NSUN2 isoform X1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106439372
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
106439372
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106439372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
DUF2621
FtsJ
Methyltr_RsmF_N
Motif
Other DBs
NCBI-GeneID:
106439372
NCBI-ProteinID:
XP_013736260
LinkDB
All DBs
Position
C1:complement(493006..496564)
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AA seq
736 aa
AA seq
DB search
MGRGRRHRGRSHRNQSEESRENAPKPLKSDAPFDSTIQNRTWSNLDFEEYYKEQRIVKAE
EWDSFIEILRKPLPAAFRVNSNGQFCDEILSMLENDFVKSLQAEAVESGEVEAIKPLPWY
PNNLAWHSNFSRKEIRKNQTLERFHEFLKLETEVGNMTRQEAVSMVPPLFLDVHPDHFVL
DMCAAPGSKTFQLLEIIHESAEPGSLPNGMVVANDVDYKRSNLLIHQTKRTCTTNLIVTN
NEGQHFPNCNSIASEKCHHPIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGSGNGLH
SLQVVIAMRGLSLLKVGGRMVYSTCSMNPIEDEAVVAQILRRCGGSVELVDVSDKLPQLI
RRPGLKKWKVHDRGGWYRSYKDVPKVQRDGVLRSMFPSGKSDKDSTTGEIASDESAEEVC
DLPLERCVRIVPHDQNTGGFFIAVLHKVSSLPDFQEKRRYTRGRNSSEKSSYEEVSDTVI
TTQPEENKEEIVVEEEAASDNGLKLEKESTIKEGTVELGKEVPPPVKGKWKGLDPVVFLR
DETVIDGIKRFYGINDESFPLNGHLVTRNSDTSTKGNVKRIYYVSRSVKDVLELNLAAGE
KIKVASVGLKMFEKQSARECEAGSCSFRITSEGLPVILPYMTKQLLYATMVDFKNLLQYK
SIKFTDFVHPQFGQKAAEVAEGYCVVILVDGTQKDGSEAVKVNSSTIAIGCWKGKASLTV
MVTTVDCDQLIQKLAC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagacgacacagaggccgttctcacagaaaccaatcagaagagagcaga
gaaaacgctccaaaacctctcaagtccgatgctcccttcgattccaccatccaaaatcga
acctggtcgaatctcgatttcgaggagtattacaaggagcaaaggatagtgaaagcagag
gagtgggattcattcattgagattcttcgtaagccgttgcctgctgccttcagagtcaac
tccaatggccagttttgcgatgagattttgtcgatgttggagaatgactttgtgaagtct
cttcaggctgaggctgtggagagtggtgaagtggaggctatcaagcccttgccttggtac
cctaacaatcttgcttggcattctaatttctctcgcaaggagattagaaaaaaccagact
cttgaaaggtttcatgagtttttgaagttggaaactgaagttgggaacatgaccaggcaa
gaagcagttagcatggtacctcctctcttccttgatgtgcatccagatcattttgtactc
gacatgtgtgctgcacctggctccaagacatttcagcttcttgagataattcacgaatca
gcagaaccagggtctctacctaatggaatggtggtggcgaatgatgttgattacaaaaga
tctaaccttcttattcaccaaactaagagaacgtgtacgaccaacttgattgtcaccaac
aatgaaggtcaacatttcccaaactgcaactcgatagcatctgagaagtgtcatcatccc
attgatcagcttctgtttgatcgtgtcttatgcgatgtaccctgtagtggtgatggcact
ctgcgcaaggctccagacatatggcgaagatggaactctggatcagggaatggacttcat
agtctacaagttgtgattgccatgagaggtttgtctctgctaaaagttggtgggagaatg
gtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttgctcaaattctg
aggagatgtggaggctctgttgagcttgtagatgtctcagataagcttcctcaacttatc
cgtagaccaggtcttaagaaatggaaggtgcatgatagaggtggctggtatagatcttac
aaagatgttccaaaagtgcagagagacggagttctaagaagcatgttcccttctggtaaa
agcgataaagactcaacaactggagaaatagcttctgatgaatcagctgaggaagtctgt
gatcttcctcttgaacgttgtgtgaggatagtgcctcatgatcagaacactggggggttc
tttatcgcagtgcttcacaaagtttcatctctaccagattttcaggagaagagaaggtat
accagaggcagaaactcatctgagaaatcttcgtatgaagaagtctctgacactgtgatc
actactcagcctgaagagaataaagaggagatagttgtagaagaagaagcagcttcagac
aatggcttgaagcttgagaaggaaagcaccatcaaagaaggcactgtagaattgggtaaa
gaagtgccaccaccagtgaaagggaagtggaaaggacttgaccctgttgttttcttgaga
gatgaaacagtgatcgacgggatcaagagattctacggcatcaacgatgagtcttttcct
ctcaacggccatctcgtgactagaaacagcgacacgagcaccaaaggcaacgtgaagagg
atttactatgtttcgagatcagttaaggatgttctcgagcttaaccttgcggctggggag
aagattaaggtcgcatctgttggcctcaagatgtttgagaaacaatcagcgagagaatgt
gaagctggctcttgctcattccggataacatcagagggattgcctgtgatccttccctac
atgaccaagcagttactttacgcaacaatggtggatttcaagaatctcctgcaatacaaa
tctatcaagttcacagattttgttcatccacagtttggccagaaagcagcagaagtagcc
gagggatactgcgttgttattcttgttgatggtactcagaaggacgggtctgaagcagtc
aaagtgaattcatcaacaatagccattggatgctggaaggggaaagcgagcttaacagtt
atggtaacaacagtggactgcgaccaacttatccagaaacttgcttgctga
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