Brassica napus (rape): 106439468
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Entry
106439468 CDS
T04128
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106439468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106439468
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106439468
Pre-60S particles
106439468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
Importin_rep_4
TPR_IMB1
Importin_rep_6
HEAT_GCN1
HEAT
HEAT_2
MMS19_C
TOR1L1_N
Vac14_Fab1_bd
IFRD
HEAT_MROH2B_C
HEAT_EF3_N
Cnd1
TPR_DNAAF5
INTS7_N
VPS15-like_hel
Arm
TPR_CAND1
ARM_TBCD_2nd
Adaptin_N
HEAT_Maestro
CLASP_N
Arm_2
ARM_ARMC5
TPR_TNPO3_IPO13_3rd
HEAT_IPO9_c
DUF1678
Phasin_2
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
106439468
NCBI-ProteinID:
XP_013736371
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Position
C9:54311591..54317919
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AA seq
1111 aa
AA seq
DB search
MASEQAQLAMILGSDSAPFETLISHLMSSSNEQRSSAEALFNLAKQTNPDTLALKLAHLL
QLSPHPEGRAMAAVLLRKLLTRDDAYLWPRLSLPTQSSLKSTMLSCIQREEAKSISKKIC
DTVSELASGILPENGWPELLPFVFQCVSSDSSKLQESAFLILAQLSQYVGETLTPHIKHL
HGVFLQCLSSNSVSSDVKIASLNAVISFVQCLSNSTERDRFQDVLPAMIRTLTESLNNGN
EATAQEALELFIELAGTEPRFLRRQLIDVVGSMLQIAEAESLEESTRHLAIEFLVTLAEA
RERAPGMVRKLPQFIDRLFAVLMKMLEDIEDDPAWYSAETEDEDAGETSNYSMGQECLDR
LAIALGGNTIVPVAYQQFSAYLVASEWQKHHASVIALAQIAEGCSKVMIKNLEQVVSMIL
SQFQSPHPRVRWSAINAIGQLSTDLGPDLQNQHHHIVLPALAAAMDDIQNPRVQAHAASA
VLNFSENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDV
VMPYLKTILMNATDKSKRMLRAKSMECISLVGMAVGKDKFRDDARQVMEVLMSLQGSEME
ADDPITSYMLQAWARLCKCLGQDFIPYMDVVMPPLLQSAQLKPDVTITSADSEDEAEDSD
DESMETIILGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIAQVAPTLVPLLKFY
FHEEVRRAAVSAMPELMRSAKLAIEQGKSQGHDLSYLKQLSDYIIPAMLEALHKEPDTEI
CVSMLEAINECLQISGNLLDEGKIRSIVDEVKQVMTASSSRKRERGERANAEDFDAEEGE
LIKEENEQEEEIFDQVGEILGTLVKTFKSSFLPFFDELSSYLTPMWGRDKTAEERRIAIC
IFDDVAEQCRDAAFKYYDTYLPFVLEACNDESPEVRQAAVYGLGVCAEFGGSVFKPLVGE
ALSRLNVVIQQPNARQSENAMAYDNAVSAVGKICQFHRDSIDASQVLPAWLNCLPLSNDV
IEAKVVHEQLCSMVERQDVDLLGPNNQYLPKILTVFAEVLTRKDVVTEETAGRMINIIRQ
LQQTLPPSALASVWASLTPEQQVALQSMLST
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaacaagcacaactcgcgatgatcctcggctccgattccgcgcccttcgaa
accctcatctcccacctcatgtcctcttccaacgagcagcgctcctccgccgaggctctc
ttcaatctcgccaagcagaccaatcccgacaccctcgccttgaagctcgctcacctcctc
cagctctcccctcaccccgagggccgcgccatggccgccgtcctcctccgcaagctcctc
acgcgcgacgacgcttacctgtggccgcgtctctccctccccactcaatcctccctcaaa
tccacgatgctgtcgtgtatccagcgcgaggaggcgaaatcgatctccaagaagatttgc
gacacggtatccgagctcgcctcagggatcctaccggagaacggatggccggagttgctg
ccgtttgtcttccagtgcgtgtcgtccgattcgtctaaattgcaggaatcggcgtttttg
attttggcgcaattgtctcagtacgttggggagactctgactcctcacatcaagcatcta
cacggcgtctttctccagtgcttgagtagtaactccgttagctcagacgttaaaatcgct
tccctcaacgccgtgattagtttcgttcagtgtctatcgaactcgaccgagcgggatcgg
ttccaagacgttttgcctgcgatgatcaggacgttgaccgagtccctcaacaacgggaac
gaagccaccgcgcaggaggcgctagagctgttcatcgaattggcgggaacggagccacgg
tttcttagaaggcagctgattgacgttgttggttcgatgcttcagatcgctgaggctgag
tccctcgaggagagtacgcgccacctggcgattgagtttttggtgactcttgctgaggca
cgtgagcgtgcacctgggatggttaggaagctacctcagtttattgacaggttgtttgcg
gttcttatgaagatgcttgaggatattgaggatgatcctgcctggtacagcgctgagact
gaggacgaggacgctggcgagacgagcaactacagcatgggtcaagagtgtttggatcga
ttggcaattgctttgggagggaacacgattgttccggttgcgtatcagcagttctctgct
tacttggttgcctctgagtggcagaaacaccacgcttctgtgattgcgcttgcgcagatt
gctgaaggttgctcaaaggtgatgataaagaatcttgagcaagtggtgtccatgattttg
agccaatttcagagtcctcatccccgtgtaagatggtcagcaataaacgcgattggtcag
ttgtctacagatttgggtcctgatttgcaaaaccaacatcatcatatagtgctccccgca
cttgctgctgctatggatgatatccagaatccgcgagtgcaggctcatgctgcttcagca
gttctcaacttcagtgaaaattgtactcctgaaatattgacaccttatttagacggaata
gtgagcaagttgcttgtgctactgcaaaatggcaaacaaatggtgcaagaaggagcttta
acagctcttgcttcagttgctgattcatcgcaggaacacttccaaaagtactatgatgtt
gtcatgccgtatctcaaaactattttgatgaacgcaactgacaaatctaagcggatgctt
cgtgccaaatccatggaatgcataagtcttgttggaatggcagttggaaaggacaaattt
agggatgatgctagacaggtcatggaagtgcttatgtcattgcaagggtctgaaatggag
gcagatgatccaataacgagttacatgttacaggcatgggctaggctttgcaagtgtcta
ggccaagatttcatcccatacatggatgttgtgatgcctcctttgctgcagtcagctcaa
cttaaaccagatgtaacaattacatctgctgattcagaagatgaagcagaggattctgat
gatgaaagcatggagaccattatactgggagacaaaagaataggaatcaaaacaagtgtc
ctagaggaaaaagccacagcttgtaacatgctttgttgctatgctgatgagttaaaagaa
ggatttttcccctggattgctcaggttgcacctacactggttcctttgctaaaattctat
tttcacgaagaagtcagaagagcagctgtgtcagctatgccggaactaatgcgctcagcc
aaactggcaatagaacaaggaaaatctcaaggacacgatctatcctatttgaagcagctt
tctgactacattattcccgccatgctggaagctttgcataaagaaccggataccgagatc
tgtgtgagtatgttggaagccattaatgaatgcttgcagatctccggaaatcttctggac
gaagggaaaattagatccatagttgatgaggtaaagcaagttatgacagcaagctctagt
agaaaacgagaaaggggagagagggccaatgctgaagactttgatgctgaagagggagag
cttattaaagaggaaaatgagcaagaggaggaaatttttgatcaggtcggtgaaatattg
ggaacactggttaagacattcaagtcttcgtttctgcctttcttcgacgaattatcctct
tacttaactcctatgtggggaagggataaaacagccgaagagagaaggattgcgatatgc
atctttgatgatgttgcagaacaatgccgtgatgccgcctttaaatattatgatacatat
cttccattcgtactggaagcgtgcaatgacgagagcccagaagttcgacaggctgctgtt
tatgggcttggagtttgtgctgagtttgggggatctgttttcaagcctcttgttggagag
gctctgtcaagactaaatgttgtgatacagcagccaaatgctcggcaatctgaaaatgcg
atggcatatgataatgctgtatccgctgtgggaaagatctgccaatttcaccgtgacagc
atcgatgcttctcaggtacttcctgcgtggttgaactgtttgcctcttagtaatgatgtg
attgaagccaaggtggttcatgagcagctctgttcaatggttgagaggcaagatgtggac
ttgttaggccccaataaccagtatctaccaaaaatcttaacagtatttgctgaggtgctt
acaaggaaagatgtggtgacagaagagacggcaggtcgtatgataaatataataaggcaa
cttcaacaaacactgccaccatcggcattggcctcagtatgggcatcattgactcccgag
cagcaggtcgctctccaatcaatgctttccacctga
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