Brassica napus (rape): 106439575
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Entry
106439575 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106439575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106439575
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106439575
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
106439575
NCBI-ProteinID:
XP_022572165
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Position
A3:18418298..18424832
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AA seq
686 aa
AA seq
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MASSNGYDDVPMLPVSCTSSSSRTRPFTSRSRSVSLSNTSSTIDVFENSSTVVLGYTDPL
GTQRQPQLVQMGDPISSTRNLELVSKHAHPYGTTCPSDYNREAAQIPTPRVSDSMVHNAR
DDDAKGWARRFVTSVDKYLPKIMEPDSKEVGGWTIFFAFSCLLSIFVDPLFFFPIQVSES
GKCIRIDEKMARVLVALRSLTDFLYFVNTLLQCRLAYTDPKSTVVGSGQLVKGSVEIAKR
YYRGNFLLDLVIVIPLPQILILWIIPHVLVIYGANTIKNLLCTAVVVQCIPKLHRLFHLL
ARKRTTGFIFESAWASFFINLFTYILAGHIVGSCWYLFGLQRVNRCLRETCEDHMESKCH
GVCKELIDCGLRLKEKLIDCERRNTTVTQAVLNWNVTAAACFQENGFPYGIYWKAVNLTH
DSNLPKKYIYSLFWGFQQISTLAGNLVPTDFVWEVLFTMAIIGLGLFLFALLIGNMQNFL
QSLGRRNMEMTLRRRDVNNWMSHRQFPDDIRTRVKNAERLNWSSTRGVNEELLFENMSDD
LQRDIRRHLFAFLKKVRIFSKMDEPILDAIRERLKHKTYLNGSMVLHSGDLVKKMVIIVR
GQMESTREDGSCTRLSKRDVYGEELLTWYERSSLNPDGTRIRMPSKGLLSNRDVKCVTNV
EAFSLSVADLDDVMSLFPNLEISKES
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccaacgggtacgatgatgttcccatgcttccagtttcatgcacatcatca
tcatctcgtactaggcctttcacttccagatcacgtagcgtttccctctcaaacacttct
tccaccattgacgtattcgaaaactcatcgactgttgttttaggctacacagatcctctt
gggacccagagacagcctcagctagtgcaaatgggtgaccctatttcctctactcgcaat
cttgagttggtctcaaaacatgcacatccttacggtaccacttgcccttctgactacaat
cgcgaagctgctcaaatccccactcccagagtttctgattccatggtccataatgctcgg
gatgatgatgctaaaggctgggctaggcgatttgttacatctgttgataaatacttaccc
aaaatcatggagcccgactctaaggaagttgggggatggactatattctttgccttttca
tgcttgttgtctattttcgtagatcccctcttcttcttccccatacaagtcagtgagagt
ggaaaatgcattaggatcgatgaaaagatggctcgcgtattggtagctcttagaagttta
acagatttcttatattttgtaaacaccctgcttcagtgccgattggcatatacagatcct
aagtctacggttgttggttctggccaattggttaagggatcagtagaaattgctaagcgt
tactaccgaggaaattttctcctagacttggtcatagtgataccacttccacagatactg
atattatggataataccgcacgtgttagtcatatatggggcaaacactataaagaacctt
ttatgcactgcagttgttgtccaatgcatcccaaagttacataggctttttcatcttcta
gccagaaaaagaacaacagggttcatatttgagtcggcttgggctagcttctttattaat
ctttttacctacatacttgctggtcatattgttggatcttgctggtatctttttggtctg
cagagagttaatcgatgccttcgtgagacgtgtgaagatcatatggaatcgaaatgtcat
ggtgtatgcaaagaactaatagattgtggtttacgcctaaaagaaaaactaatagattgt
gagcgtcgtaacacgacagttacacaggctgtgttgaattggaatgtgactgctgccgct
tgttttcaagagaatggttttccttatggaatctattggaaggcagtcaatctcacccat
gactctaatctgcccaaaaaatacatatactctcttttctgggggtttcagcaaatcagc
acgcttgctggaaacctagtcccaactgactttgtctgggaggtcttatttaccatggct
atcatcggactggggcttttccttttcgcgcttcttattggtaatatgcagaacttcctt
cagtctctcggccgcaggaatatggaaatgactctgagacggcgtgatgtaaataactgg
atgagtcatagacagtttccagacgatataagaacgagggtgaaaaatgctgagcgatta
aactggagttctactagaggagttaacgaagaattgctctttgagaatatgtctgatgac
cttcaaagagatataagacgacacctcttcgcatttctcaagaaggtgaggatattttcg
aagatggatgaaccaatcttagatgccatccgtgagaggctgaaacataagacttactta
aatggtagcatggtcttgcacagcggagatctagttaaaaaaatggtaatcatagtgaga
ggtcagatggagagcactcgagaagacggttcttgtactcgtttatcaaagagagacgtt
tatggtgaagaacttctcacttggtacgaacgctcttctctaaaccctgatgggactagg
ataaggatgccatcaaagggattgcttagcaacagagacgttaagtgcgtgacaaacgtg
gaggcgttttcactcagtgtagcagatcttgacgacgtcatgagcttgttcccgaatctc
gagatttctaaggagtcatag
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