Brassica napus (rape): 106439793
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Entry
106439793 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP133-like isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106439793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106439793
03036 Chromosome and associated proteins [BR:
bna03036
]
106439793
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106439793
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106439793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
106439793
NCBI-ProteinID:
XP_013736761
UniProt:
A0A816VZU3
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Position
A3:complement(20630016..20634988)
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AA seq
1287 aa
AA seq
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MFSPLTKRPKQSSRTPLHRAAPPDSPLTPAPHNRESANRDHFISDRPATGTPAPWAPRLS
VLARVSPVNDANQLKPVFVGEFPQLVRDEQTRNNTHPGDVCVSGGMDRETCLSWFITGSK
LFVWSHLTASPSRKCVALELPLANQESVSGDGKSWLVSVVSWDTSPGAAARSRSPIGIVM
VNRKTRGVVFWSDIFSSQEASPVTSLGSFDETGVYSSPKVRKSSRQSNGIRGNRSGYSDL
NALITTSVDATERICVAVACSSSGELWQFTCSPTGIKSNQIHLDVSSSSVSEGYPRSLVW
RFSQGSARESCCKFFMLTDCDIHCFAIEPDLTVSEVWRHEIVGSDGDSGIKKDIASQKQI
WPLDLQVDDQGKVITVLVATICMDRANSSSYTQYSLLTLQQKSETRFADGREERVLEKQA
PVQVIIPKARVEDKDFLLSMKLRVGGRPKGSAMILSGDGTATVCYCHGNSTRLYKFDLPY
DAGKVLDASVLSSTDEHECGAWTVLTEKAGVWAIPEKAVLLGGVQPPERSLSRKESSNER
SRDETRSLYNIDRTARLDDSDLQNSEDKVNAKMGVFRQTARDEESEALLGQLFEDFLLSG
RADGSLGKLSQSGAFDRDGETNVFARKSKSIVDTLAKHWTTTRGAEIVAMTVVSTQLLEK
QQKHEKFLHFLAVSKCHEELCSKQRHSLQIILENGEKLAAMIQLRELQNLINQSRSGRFG
SPHAVSEDQVSCALWDLIQFVGERARRNTVLLMDRDNAEVFYSKVSEIEEVFYCLNRQLE
YIIRAEQPLGVQVQRACELSNACVTILRAALDYKNEHQMWYPPLEGLIPWHSQPVVCNGL
WCIASFMRHLLTEGSRIDISAKSEIYMHLEVLTEVLLEACASSATAKLEREEEDKALLDE
YWTRRDTIFDCLYEQAKELMEADFQNVNERAEMTDEDIFKNRCSDLLSIAKRHAGYKIMW
RICYDLNDTGLLRNLMHEGVGPQGGFSYFVFQQLYDMKQFSKLLRLGEEFQDELLIFLKR
HSDLLWLHQVFLHQFSSASETLHSLALAQDEESMTATNERTVSESEDVQPTFADRKRFLN
LSKIAYVADKDADSKSIVKRIEADLKLLKLQEELTKALPSDEQTRNRLFRPEELIEICLS
IQGRWTAIKAFEVFAWTSCSFREKHRSLLEECWRNAADQEDWDRLHQASANEGWSDKETL
QNLKNTALFQASKRCYGPNRVNAFDGDFAQVLPLRRENPEDKTSSVEDLLMSHKDFAEAG
KLMLTAIMLGCVEEEGIEAEDLSSPMA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccactgacgaagagacctaagcaaagctctcgcactccgctccaccgagcc
gctccgccggattctccactaactccggcacctcacaatcgcgaatcggctaaccgtgac
catttcatctcagatcgtcccgccaccggaactcctgcgccctgggctcctcgtttgtct
gttctcgctagagtttctcctgtgaatgatgcaaaccaattaaagcctgtgttcgttgga
gagtttccccaattggttagagatgaacaaacgaggaataatactcatcctggtgatgtt
tgtgtatcaggtggaatggatagagaaacctgcctttcttggtttatcactgggagtaaa
ctttttgtttggagtcacttgacagcctcaccatcgagaaaatgcgttgctcttgaactt
cctttggccaatcaagagtctgttagtggtgatggtaaaagctggttggttagtgttgtc
tcttgggatacttctcctggtgcagctgctcgatctcgtagtcctattggtattgtgatg
gttaacagaaaaactcgaggtgttgtgttctggtcggacattttttctagtcaggaagct
tctcctgttactagtcttggatcttttgacgagactggtgtgtatagttctcctaaggtc
aggaaaagctctcgacaaagcaatgggataagaggcaatagatcaggatatagtgatctt
aatgctttgattactacctcggttgatgcaacggagcgcatttgtgttgctgtcgcgtgc
agttccagcggtgagctgtggcagtttacttgtagccctacaggcattaaaagtaatcaa
atacacttggacgtcagctcttcctccgtgagtgaaggttacccgaggtctctggtctgg
cggttttcgcaaggatcggctagagagtcttgctgtaaatttttcatgttaacggactgt
gacatacattgttttgcaattgagcctgatctaactgtttcggaagtctggcgtcatgag
attgttggcagtgatggcgattccggtatcaagaaagatatagcaagtcaaaagcagatt
tggcctctagatttgcaggtggatgatcagggtaaagtgatcactgttcttgttgctact
atttgcatggaccgcgccaacagttcaagctatacacagtattcgcttttaaccttgcaa
caaaaatctgagacgagatttgcagatggcagagaggagagggttcttgagaaacaggct
cctgtccaagtcattattccgaaagcaagagtggaggataaagacttcttgctctctatg
aaactcagagttggtggtagacctaaagggtcagctatgattctttcaggtgatggaaca
gccacagtctgctactgtcatggtaactccacccggctgtataagtttgatttaccttat
gatgctggcaaggtcttggatgcttccgttctctcctcaactgacgaacatgaatgtggt
gcatggactgtgctaactgagaaagctggagtgtgggctataccggagaaagctgtccta
cttggtggagttcaacctccagagagaagtttgtctcgcaaagagagctcaaatgagaga
tcacgagatgagacaaggagcttatataatattgatagaactgctagattggatgattcg
gatttacaaaatagtgaagacaaagttaatgctaaaatgggagtttttcgtcaaacagcc
cgtgatgaagagtcggaagctttgcttggtcagctctttgaggattttctgttatctggg
agagctgatggttccttggggaagcttagtcaatcaggtgcatttgatagagatggagag
accaatgtttttgctcgcaaaagcaaatctatagttgacacattagctaagcattggaca
acaactagaggggctgagattgtagctatgactgttgtatctacacaattgctggagaaa
caacagaaacatgagaaatttctacactttcttgccgtttccaaatgccatgaggagttg
tgttctaaacagaggcattctttgcaaataattttggaaaatggtgaaaaacttgctgca
atgattcaactccgggaactgcaaaacttgattaaccagagccgctcaggcagatttggc
tcgccgcatgctgtctcagaggaccaggtttcatgtgccctttgggatcttattcagttt
gtaggggagagagcccggagaaatacagttctgttgatggacagagataatgctgaagtt
ttctacagcaaggtatctgaaattgaggaagtattctattgcctgaacaggcagctagaa
tacataatcagagctgaacaaccactgggagttcaagtgcagagagcctgcgaactctca
aacgcatgtgttacaattcttcgggctgccttggattacaaaaatgagcatcagatgtgg
tatccgccacttgaaggtttaataccttggcactctcagcctgtcgtgtgtaatgggctg
tggtgcattgcttcctttatgcgtcatctgttaactgagggatctaggattgatatctct
gctaaatccgagatatacatgcatctcgaagtgcttactgaagttttgctagaggcttgt
gctagttctgccactgctaaattggagcgagaagaagaagacaaagctttgcttgatgag
tactggacacgacgggataccattttcgactgtctttatgaacaggccaaagagttaatg
gaagcagatttccagaacgtcaatgaaagagctgaaatgacagatgaagacatcttcaaa
aaccgttgttcagatttgctttctattgcaaagcgacatgcaggctataaaattatgtgg
aggatatgctatgatctcaatgatactggtctgctcagaaacttaatgcacgaaggtgtg
ggaccacaaggaggcttcagttacttcgtgtttcagcaactttatgatatgaaacagttc
tctaagcttctaaggcttggggaagaattccaagacgagctattgatatttctgaaacgc
cactctgatctgctgtggcttcatcaagtgtttcttcatcaattctcatctgcctctgaa
actcttcactcactggctctagcacaagatgaagagtctatgacagctactaatgaaaga
acggtgtcagaatctgaagatgtacaaccaacatttgcagaccgcaagcggttcctgaac
ctttcaaagatagcctatgtggcagataaggatgctgattcaaaatcgattgtgaagcgc
attgaagctgacctcaaattactgaagctgcaggaagaattaacaaaagctcttccaagc
gatgaacaaaccagaaaccgactgttccgaccagaggagctcattgaaatttgtttaagc
atccagggccgatggacagctataaaggctttcgaggtgtttgcatggacgagctgttca
ttccgtgagaagcacaggagtctcttggaagaatgctggagaaacgctgcggatcaagaa
gactgggacaggcttcatcaagcctctgctaacgaaggctggagcgacaaggaaacatta
cagaatctaaagaacacagcgcttttccaggcttcgaagaggtgttacggaccaaaccga
gtcaacgcgtttgatggggactttgcacaagtccttcccctgagacgagagaaccctgag
gataaaacttcttctgtagaggacttgttgatgagccacaaagatttcgccgaggcgggt
aaactaatgctaactgcaatcatgctgggttgtgtagaagaagaaggtatcgaagcagaa
gatctttcatctccgatggcgtaa
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