Brassica napus (rape): 106439948
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Entry
106439948 CDS
T04128
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bna04990
]
106439948
Domain-containing proteins not elsewhere classified [BR:
bna04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
106439948
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GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
SET
TPR_11
TPR_10
TPR_17
TPR_MalT
zf-MYND
TPR_9
Motif
Other DBs
NCBI-GeneID:
106439948
NCBI-ProteinID:
XP_013736967
UniProt:
A0A816L8C1
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Position
C5:35402500..35407070
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AA seq
785 aa
AA seq
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METLKSRIPEHLVQTVKSSSSVDDLLSSSSSLLRFLVGLPQFHQAVSELADPDLGCCGKS
QESSLDLKRSGNLCFRSRSFDDALRFYSKALRVARDNTLLASLFLNRANALHNLGLLEES
LRDCHRALRIDPCYAKAWFRRGKLNTLLGNYKDAFRDITVSMSLDSSSAGKKQLQNELLA
IPDFQNKQTSENTLCFAAADLPNVQSEVKLRCVSTKEKGRGMVSESDIEQASVIHVEEPF
CVVISKSCRETHCHFCLNELPPDSVPCPSCSVPVYCSESCQIQSGGMLSTNEMDKNSIFH
NLPDDIVDHIKGVTSAVRYYSETECLQEHQHECRGANWPAVLPSDAVLAGRVIMKLINQG
ETAMDLSNLHDKLDLSHSYSKMSPESKLELHLLSIVLIWCLNKSCCPDLSVCEASVSQTI
ILLSQIKVNSMAIVRMKSSGDSFKCIPAGNVSAKEPIQSLEQIRVGQALYKIGSLFNHSC
KPNIHLYFLSRGLVMRTTEFVPVGCPLELSYGPEVGKWDCKDRIRFLEEEYFFNCRCRGC
SQMNISDLVINGYCCVNTSCTGVVLDSSVAACESEKLNHFLAAAKSLDHHCLVSEKVYAG
VSEVASSLLIKPSGSLHIKADKCLKCGSRCEVENSHVEVNKAWNHLRRVEELMNSGRANI
SVLSDCLRSIAVLRTFLHMYNKDIADAEDKVAQACYLAAEMKGAREHCEASIKILKRLYG
DEHVVIGNELVKLASIQLASGDSSGAWETTKRLSQIFSKYYGSHAETLFSYLSCLKLEAA
KAVNL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttgaaatcgcgaatacctgagcatcttgtacaaacagtgaagagcagcagc
agcgtcgacgatctactctcctcttcttcgtctctgctccgtttccttgtgggtcttccc
caatttcatcaagcggtgagtgagttagcggatcctgatctgggttgctgtgggaagagc
caagagtcttctctcgacttgaaacgtagcggaaatctctgcttccgcagccggagtttc
gacgatgctttacgcttctactctaaagccttacgtgttgctcgagacaacaccttactc
gcttctctctttctcaatagagctaatgcccttcataatctggggcttcttgaagagagc
ttgcgggactgccatcgtgctcttcgtattgatccttgttacgccaaggcttggtttagg
agaggcaaactcaatactcttcttggaaactataaagatgcgttccgggacatcacagtt
tctatgtctctcgactcatcatctgcggggaagaagcagctgcagaacgaacttctggct
attccagactttcagaataagcaaacatcggagaacacactctgttttgctgctgcggat
ctacccaacgtgcaaagtgaagtcaagctgcgttgtgtatccacaaaagagaaaggcagg
ggcatggtatcagaatctgatattgaacaagcttctgtcatacatgtcgaagaaccattt
tgtgtggtcatatcaaaaagttgtcgggaaacacattgccacttttgccttaacgaatta
cctcctgactctgttccatgtccatcatgctcagtacctgtgtattgctcagagtcctgc
cagattcaatcaggtggaatgctgtccactaatgagatggacaagaattcgatttttcat
aacctacctgatgatattgtggaccatattaaaggcgttacatcagctgtaagatattat
tctgaaactgagtgtcttcaagagcaccagcatgagtgtcggggagctaattggcctgct
gtactgccatctgatgctgttttagctggtcgagttataatgaagttgataaatcaaggg
gaaacagctatggatctctccaaccttcatgataaattagatctttcccatagctattct
aagatgagtccagagagcaagttagagttgcatctactttccatagtattgatttggtgc
cttaataaatcttgctgccctgatctttcagtctgcgaagcttctgtgtcacagactatt
atactgctttcacaaatcaaggtgaactctatggcaattgtccggatgaaatccagcggc
gattctttcaagtgcatcccagctgggaacgtttcagcaaaagagccgattcagagttta
gagcagatcagagttggtcaggctctttataaaatcggtagcttattcaatcattcctgc
aagccgaacatccatttgtatttcctttcacgtggacttgttatgcgaacaacagagttt
gttcccgtgggttgccccctagaactgtcatatggtcctgaggtcggaaaatgggattgc
aaagatcgtattagatttcttgaagaggagtacttttttaattgtcggtgccgtggctgt
tctcaaatgaacatatcggaccttgttattaatggatattgctgtgtcaatacaagctgt
actggcgtagtcttggatagtagtgtggctgcatgcgagtccgagaagctaaatcatttt
ttggctgctgcaaaaagtctagatcatcattgtctggtgagtgaaaaggtgtatgctggt
gtcagtgaagtagcttcaagtttgctaattaaacctagtggttctcttcatataaaagca
gataaatgtttgaaatgtggttcccgctgtgaagtggaaaactctcatgtagaggtgaac
aaagcttggaatcacctgagaagggtggaagaattgatgaattcaggacgtgccaatatt
tctgtattatcagattgtttaaggtccatcgctgtgctcagaactttccttcacatgtat
aacaaagacattgccgatgcggaggataaggttgctcaggcttgctatttagctgcagaa
atgaagggtgcaagggagcattgtgaagcgtccattaagattctgaagaggctgtatggg
gatgagcacgttgtgattggaaatgaactggtgaagcttgcgtcgattcagcttgcatca
ggtgattcgagtggagcctgggagactacaaagagattgtctcaaatattctcgaagtat
tacgggtcacatgctgaaactcttttctcttatctctcatgtcttaagctagaagctgcc
aaagccgttaacttgtga
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