Brassica napus (rape): 106440237
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Entry
106440237 CDS
T04128
Name
(RefSeq) RGG repeats nuclear RNA binding protein B
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106440237
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106440237
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GEMI5_RBS
Radical_SAM_N
Motif
Other DBs
NCBI-GeneID:
106440237
NCBI-ProteinID:
XP_013737312
UniProt:
A0A078F983
A0A816VXG0
LinkDB
All DBs
Position
C7:47138467..47140631
Genome browser
AA seq
353 aa
AA seq
DB search
MATVNPFDLLDDDTEDLHKLVAAKPLKSEKTAPVQLGKLPTKPLPPSQAVREGKNGPGGG
GRGGGGHGRSGGFNREPRNNDGPANENGYVGGYRRSEEGDGARRGGSVGGYRGRGGRRGG
FNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAVVEKSL
AAEKEGEATDANKETPVEEKAEPEDKEMTLEEYEKVLEEKRKALQATKIEERKVDTKVFE
TMQQLSNKKSNNDEVFIKLGTEKDKRPVEKEEKTKKSLSINEFLKPANGERYRGGYRGGR
EGRGGRGPREGAEGRGRGPRGADGGENQRAAAPKRVAPAPKIEDAAQFPTLGK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgaaccctttcgatctcttggacgatgacacagaggacctccacaagctc
gtggcggctaagccattgaagtctgagaaaacagctccggttcagcttggtaagctgccg
actaagccgcttcctccttctcaagctgtgagggagggaaagaacggacctggaggagga
ggtcgcggtggtggtggacatggtaggagcggtggattcaacagggagcccaggaacaat
gatggtcctgctaatgaaaacggatatgttggaggctacagacgctctgaggaaggagat
ggagcgagacgtggtgggtctgtgggtggataccgtggccgtggtggtcgacgtggaggc
ttcaacagtggagagtcgggtgactttgaacgcccacgtaggaactttgaccgccagagt
ggaacaggtcacggaaatgggtttaaacgcgatggagctggccgtggcaactggggaacc
aatgaagatgaaattcctccagtaactgaagaatccgcagcagtggtggagaagagtttg
gctgctgagaaggaaggtgaagcaactgatgctaacaaagagacacctgttgaagagaaa
gcagagcccgaggacaaggagatgactctggaagagtatgagaaggttttggaggagaag
aggaaagctctacaggcaacaaagattgaggagaggaaggttgacacaaaagtgtttgag
accatgcaacagctctcaaacaaaaagagcaacaacgatgaggtcttcatcaaactggga
acagagaaggacaagcgcccagttgagaaagaggagaagaccaagaagtcgttgagcata
aatgagtttctgaaacctgcgaatggagagaggtacagaggtggttaccgtggtggaagg
gaaggacgtggaggtcgtggaccaagagaaggagctgaaggaagaggtcgtggaccaaga
ggagccgatggaggagaaaaccagagggctgctgcaccaaaaagggtcgctcctgcacca
aaaattgaagacgccgcacagttccctactctgggaaagtga
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