Brassica napus (rape): 106440505
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Entry
106440505 CDS
T04128
Name
(RefSeq) F-box protein SKIP16
KO
K10290
F-box protein 3
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106440505
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106440505
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Gene cluster
GFIT
Motif
Pfam:
DUF525
SMI1_KNR4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
106440505
NCBI-ProteinID:
XP_013737649
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All DBs
Position
A8:22567270..22569218
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AA seq
423 aa
AA seq
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MCLEEAGDLVLHIILSKIGPENTARVACVSKRLKVSASEDSLWSIFCSLDLNISAPLDPH
GEPSPSFKAAYQSWRESFRMYPWHLVKRVRRCWDNLKLWLSLNFPEAEATLRKGATEDDL
EEFESALRIKLPLPTRLLYRFVDGQEPRLDGSLGLIGGYSVYSHDVNVYLLPLKEVIRET
NETMSDLGVSNGSNFIVVAASATASLKMFFLDCSDGQLYTGTSTRQMLPCVPEINGDQQQ
DAMLRWLEEHGRRLQSGVIKVREEDNVKSISLFPEVPPLCSVAVTNGVQVRASSVFIPEV
SNLRAQPPAYWYAYSIRMSLMPEGCFLNGRHHSSCQLYWRHWIIRADDEVIDKVNGEAVI
GKYPLLQAGEEEFVYESCSNFPTTSGSIEGSFTFIPGSLKDPKGSQFEVKVEEFPLKLPD
YIF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctagaggaagctggagatttggttctccacatcatcctgtccaaaatcggacct
gaaaacacagcgagagtagcttgcgtcagcaaacgcctcaaggtctccgcctccgaggac
tccctctggtccatcttctgttcccttgacctcaacatctctgctcctcttgatccccat
ggagaaccttctccttccttcaaggcggcataccagtcatggagagagtcctttagaatg
tatccatggcacctcgtgaaacgcgttagacgttgttgggacaacctcaaactatggttg
agcctaaacttccctgaagcagaggcaacactgaggaaaggagccacagaggatgatctt
gaagagttcgagtctgctctcagaatcaaactccctctccccacaaggcttctctaccgt
ttcgtcgatggccaagagcctcgacttgatgggtctctaggccttattggtggctattct
gtgtactctcatgatgttaatgtctacttgctacctctcaaggaagttataagggagacc
aacgagaccatgagtgatctcggtgtctctaatggatccaacttcatcgttgtggctgca
tccgcgacggctagtttgaaaatgtttttccttgactgcagtgacgggcagctttatact
gggacaagtacacgccaaatgcttccctgtgtgcctgagatcaacggtgatcagcagcag
gacgctatgctgcgttggttggaagaacatgggaggaggttacagagcggtgttataaaa
gtccgtgaggaggataacgtcaaaagtatcagtttgttcccggaggttcctcctttgtgt
tctgtcgctgtaactaatggtgtgcaggtgcgtgcctcgtctgtgtttatccctgaagta
tccaaccttcgtgctcagccaccggcttactggtatgcttactccatccgcatgtctctc
atgccagaaggatgcttcttgaacgggagacatcatagctcttgccaattgtattggagg
cattggattatccgagctgatgatgaggtgatagataaagtcaatggagaagctgtgata
ggaaagtaccctctcttacaagccggggaagaagagtttgtgtatgagagttgttcaaat
tttccaacaactagtggatccattgaaggatctttcacctttatacctggaagtttgaag
gatccaaaagggagtcaattcgaagtcaaagtcgaagagtttcctctgaagttaccggac
tacatcttctaa
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