Brassica napus (rape): 106440526
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Entry
106440526 CDS
T04128
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
bna
Brassica napus (rape)
Pathway
bna04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106440526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106440526
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Others
AP-1 complex
106440526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
INTS1_R4
HEAT_EZ
Atx10homo_assoc
HEAT_GCN1
XMAP215_CLASP_TOG
Arm_2
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
106440526
NCBI-ProteinID:
XP_048618796
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All DBs
Position
A3:complement(25775146..25784785)
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AA seq
880 aa
AA seq
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MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVLNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQKCLKDDDPYVRKTAAVCVAKLFDINAELVEDRGFLEALKDLISDNNPMVVA
NAVAALAEIQDKSASPIFEINSVTLTKLLTALNECTEWGQVFILDSLSRYKAADPREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVITDDSNQLEPSLLDELLANISTLSSVYHKPPEAFVTRLKPTVQKTEDEDYVE
GGETETSGNPVDGAAPVAAAPAPVPDLLGDLMGTDDAAIVPVDDYTTLSGPPLPVVLPAS
SGQGLQISAQLTRQDGQVFYNMLLENNSQTVLDGFMIQFNKNSFGLAAAGPLQVQPLQPG
ESARTMLPMVLSQNMSDGPTNSLLQVAVKNNQPPVKYFTDKIVLHALFSEDGRMERGTFL
ETWRSLPDSNEVQKDFPGITITSIDSTLDLLAASNMFFIAKRKNGNQDVLYLSAKAPKGV
PFLIELTAMVGQPGLKCAVKTPTPEIAPLFFESLEMLFKS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcatgattccaaatacttctccacaacgaagaagggagagatccctgagctc
aaggaagagctcaattcacagtacaaggataagaggaaagatgctgttaagaaggttatt
gcggctatgactgttggaaaggatgtttcttcgcttttcactgatgttctcaattgcatg
caaacggagaatctggagctcaagaagcttgtttacttgtatctcattaactacgctaaa
agccagcctgatcttgctatcctcgctgttaatacttttgttaaggattcacaagatcca
aatccgttgatccgtgctttggctgtgcggacaatgggctgcattcgtgttgataagatc
actgagtatttgtgcgatcctcttcagaaatgcttaaaggatgatgatccatatgttcgc
aagacagcagctgtttgcgttgccaaactgtttgacataaatgctgagttagtcgaggat
aggggtttccttgaagccttgaaggatttaatatcagacaacaatccgatggttgtggca
aatgctgtagcagcccttgcagagatacaagacaagagtgctagtcccatctttgaaatt
aatagtgttaccctcacaaagctccttacagctttgaacgaatgtactgagtggggtcaa
gtttttatattggattcgctgtcaaggtataaagcagctgatcctcgtgaagctgaaaat
attgttgagagagtcactccaaggttacaacatgccaattgcgctgtcgtgctttcagcc
gttaagatgatccttcagcagatggagctaattactagtacagatgtgattcgaaatctt
tgcaaaaagatggcccctcccctagttacattgctttctgcagaacctgagatacaatat
gttgcacttcgtaacattaaccttattgtccaaaaaaggcccactattcttgcccatgaa
atcaaggtgttcttctgcaagtataatgatcctatttatgtcaagatggagaagttggag
attatgataaaacttgcttctgacagaaacatagaccaggttcttctggagttcaaagag
tatgccacggaagtagatgttgattttgttcggaaggctgttcgtgcaataggcagatgt
gccatcaaactggaaagagcagcagaacggtgcatcagtgttttacttgagctgatcaag
atcaaagtaaactacgttgttcaggaggccatcatagtcatcaaagatatctttagaaga
tatccaaacacgtatgagtccataattgcaacactctgtgagagtctagatacattggat
gaaccagaagcgaaggcatctatgatttggatcattggtgaatatgctgagagaatcgac
aatgctgacgaactacttgaaagcttcctggagaatttccctgaagaaccagcacaggtc
cagctgcagcttcttacagcgacagtcaaactatttctgaagaagccaactgaaggccca
caacaaatgattcaggttgtcttgaataatgctactgtggagacagataatcctgatctc
agggatcgtgcatacatctactggcgtcttctatctactgatcccgaggcggcgaaggat
gttgttttagctgaaaagcctgtgattactgatgactcaaaccaacttgagccgtcactc
ctggatgagctgcttgcaaatatttccaccttgtcctctgtgtatcacaagccgcctgag
gcttttgtaacccgcttgaaacccacagttcagaaaacggaagatgaggactatgtggaa
gggggtgaaacagagacatctggtaatccggttgatggtgcagctcctgtagcggctgct
ccagcccctgtgcctgatctcctaggggacctaatgggaacagatgatgctgcaattgtc
ccagtagatgattacacaactctgtcaggtcctccactgcctgttgtcctgccagcatca
agcggtcaaggtctgcagattagcgctcaattaacccgacaagatggtcaagtattctac
aatatgctcctcgagaacaactcgcagacggttctcgatggattcatgattcagttcaac
aaaaactcattcggccttgcagctgcaggacctcttcaggttcaacctcttcaacccgga
gaatctgccaggacaatgttgccaatggtattgtcccagaacatgtctgacgggcccacc
aactctcttttgcaagttgccgtcaaaaacaatcagccgcctgtcaagtacttcacagat
aagattgtacttcacgctcttttctcagaagatggtaggatggaacgcggaaccttcctc
gagacgtggaggtctttaccggattcaaacgaggtccagaaggattttcctgggataacc
ataacgagcattgactcaacgctcgacttgctagccgcgtcaaacatgttcttcatagca
aagcgcaaaaacggaaaccaagacgtgctgtatctatcagccaaagccccaaaaggcgta
ccattcttgatcgaactaacggccatggtgggtcagcctggtcttaaatgtgcggtcaag
actccaacccctgagatcgctcctctcttctttgaatcccttgaaatgctcttcaagtct
tga
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