Brassica napus (rape): 106440550
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Entry
106440550 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106440550
03009 Ribosome biogenesis [BR:
bna03009
]
106440550
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106440550
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106440550
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106440550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Protamine-3
Cas3-like_C_2
AAA_22
ARTD15_N
Motif
Other DBs
NCBI-GeneID:
106440550
NCBI-ProteinID:
XP_048594624
LinkDB
All DBs
Position
A8:complement(10698377..10702908)
Genome browser
AA seq
798 aa
AA seq
DB search
MSGAFFYDAASDDDLDFLNHEEESSDEDVVAEERKARAEGGGEDEEDSEVEDEDGEEEEE
DEKTTKKGSTDAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIKHRPLPISAEEVEEE
EEEEEDEEDVSEAEPDKQEEYLSEDEEAADSKADNVAAKPFFSTVDGVSFHANSFMELNL
SRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPK
RVFATRVLILTPTRELAVQIHSMIQKLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVA
TPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIQELVRLCPKRRQTMLFSATM
TEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSK
VIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAAR
GLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDNDRSLLKVIAKKVGSK
LKSRIIPEQSIVKWSQIIDEMEDQYSAVIRLEREERALRKAEMEFAKAENMIEHRDEIFA
RPKRTWFMTEKEKKLVAKTEKDSAGNPSGNELVSADIAEDLKMKEKRKREREKNLPRKKR
RKLEAAREMLEDNEEEDEEEEEGEDEKRGRSRGKDKKKKNEPEKKGLTLVDLGYRRAKAV
KAKQRAIDSGKMDRPTPNKKQNLNRTKPKTQPRNEEMKDLFKSDMSDKKQGRGGAAASAK
PRGKSKNSFKSKGRYKRR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggccttcttctacgacgccgctagcgacgacgatctcgacttcctcaaccac
gaagaggagagcagcgacgaagatgtagtagcagaagagcgtaaagctcgagcagaaggt
ggtggagaagacgaagaagatagcgaagttgaggatgaagacggcgaagaagaagaggaa
gatgagaaaactacaaagaaaggaagcaccgatgctcaatctccttgggatttcgcgtcg
tattcaagctccgtcggggaagaacacgcccgccgtcacacaacctctatagatgagaag
atttcaaaagctatcaagcatcgtcctcttcctatctccgctgaggaagtagaagaagaa
gaagaagaagaggaagatgaagaagatgtctccgaggctgaacctgacaaacaagaggag
tatctttcggaagacgaagaggcagctgattcgaaagcagacaatgttgcagccaagccg
ttcttctctaccgtggatggagtttcgtttcatgccaactctttcatggagctcaacctc
tctcgtccgttgcttcgagcttgtgaaactcttggatacaagaaacctaccccgattcag
gcagcgtgtatacctttagcacttacagggcgtgatctttgcgccagtgcaatcactgga
tcagggaagactgctgcgttcgctttacctactcttgagaggttgctgtttcgtcctaag
cgggtctttgctactagggttcttattctcactccaaccagggagctggctgtccagatt
cacagtatgattcagaagcttgcacagtttactgatatcaaatgtggattgattgtagga
gggctttctgtgagggagcaagaggttgttttgaggtctatgccagatattgttgtcgct
actcctggacgtatgatagatcatttgcgtaattcgatgtctgtcgatttggatgatcta
gcggttttgattctcgatgaagcagatcgtcttctacagactgggtttgccactgaaata
caagagctggttcgcttatgtcccaagagaaggcaaacaatgctcttctcagccacaatg
actgaagaagttaaagagcttgtcaaactttccttgaacaaaccgctgcgtctctcagct
gatccatcggctagaaggcctccaggccttactgaagaggtggtaagaatacgcaggacg
cgtgaggcaaatcaggaagctgttcttctttcattatgcacaagaacttttaaatcaaaa
gtcatcatctttagtggaacaaaacaggctgcacatagactgaaaattttgttcggacta
gctggcctcaaagcagctgagctccatggaaacctaactcaagcacaacgtcttgattct
ctggaacttttcaggaagcaagaggttgattttctcattgctactgatgtggctgctcga
gggcttgatattattggtgtccaaactgttataaattatgcctgtcctcgggaaatagac
agttatgttcacagagttggtagaacagctagggctggaagagaaggttatgctgtaacc
tttgttactgacaatgaccgatcccttttgaaagtcattgccaagaaggtgggttcaaag
ttaaaaagcagaatcatcccagagcagtcaatcgttaagtggtctcagataatcgatgaa
atggaagatcaatactctgctgttattcgactagagagggaagagcgagctctaaggaaa
gctgaaatggaatttgcaaaggcggagaacatgattgaacacagagatgaaatattcgca
cgcccaaaaaggacttggttcatgacagagaaggagaagaagctcgtggcgaaaactgaa
aaggattctgctggaaacccttctggaaacgaactagttagtgctgatatagcagaggac
ctcaagatgaaggagaagagaaaacgcgaacgcgagaagaatcttccaaggaaaaaacgt
agaaagcttgaagctgccagagagatgctagaggataacgaagaagaagacgaagaggaa
gaagaaggagaagatgaaaaacgaggaagatcaagagggaaagacaagaagaagaagaac
gaaccagagaagaaaggattgacacttgtggatcttggttacagacgagcgaaggcggta
aaagcaaaacagagagcaattgattcgggcaagatggatagaccaacgccgaacaagaaa
caaaacctaaaccggactaaaccaaaaacgcagcctcgaaatgaagagatgaaagatctg
ttcaagagtgatatgagcgacaagaaacaaggcagaggcggagctgcggcttcagcgaaa
cctcgcgggaagtctaagaactctttcaagagcaaaggccgatataagcgtaggtag
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