KEGG   Brassica napus (rape): 106440584
Entry
106440584         CDS       T04128                                 
Name
(RefSeq) histone deacetylase 7
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106440584
   03083 Polycomb repressive complex
    106440584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106440584
Enzymes [BR:bna01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106440584
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106440584
   HDAC complexes
    Sin3A-HDAC complex
     106440584
    BRAF-HDAC complex
     106440584
    REST complex
     106440584
    SHIP complex
     106440584
    MiDAC complex
     106440584
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106440584
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106440584
  Chromatin remodeling factors
   NuRD complex
    106440584
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106440584
NCBI-ProteinID: XP_013737740
UniProt: A0A078HM81
LinkDB
Position
A6:10687018..10688960
AA seq 409 aa
MENAASLASGPDGKKRRVTYFYEPNIGDGSQRVSQQISTTHNLIRSYHLHNDMDIVRPSL
AKDSDFVQFHSPEYIACLATLTPEYVDMANKSESVAETTLELFDLDEWDTPFFPGLIDYC
RLYAGGSICAAAKLNRSEADIAINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRV
LYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQSRGDITDNGVEKGEYYSLNAPLKNGL
DDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIEGHGACLGYIRSFN
VPLMLLGGQGHTLGNVARCWCYETAVAVGKVIDDDLDTNVSDACFAPGYQLHIEPNRMKN
LNTDEYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEAVEEDMETR
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggagaatgcggcgagcttggcttcgggtcccgacggaaagaaacggcgcgtgacctac
ttttacgagccaaacatcggcgacggcagtcaacgggtatcccaacagatcagtacgact
cacaacctcatccgcagctatcacctccacaatgacatggatatcgtccgccctagcctt
gccaaagattcagatttcgttcagtttcactcgccggagtacatagcatgcctcgctact
ctcacgccggagtatgtcgacatggctaataagtcagaaagcgtagccgaaactaccctc
gagctcttcgacttagacgagtgggacacccctttcttccctggcctcatcgattattgc
cgtctctacgccggtggttctatttgcgccgccgcgaaactgaaccgaagcgaagctgat
atcgccatcaattggtccggcgggatgcaccgcgccaagagagatgaggctcgtggcttt
ggctacgtcaacgacgttgttcttgggatcctcgagttgctcaaagtcttcaagcgagtt
ctctacatagatattgggtattaccatggggatgcagtacaagaagcgttctacaaaact
gatagagttatgactgtttctttccacgagtctgtggtccaaagcagaggagacataaca
gacaacggggtagaaaagggagaatactattctctaaatgctccgctgaagaatggtttg
gacgatgcaagtttcgtcaatttattggtacctgtcatccacaaggctatggaggtttat
cagccggaagcaattgttcttcagtgtgggcctgattcactagctggtgacgcgttgggt
aaattcaacttgactatcgagggtcatggtgcttgtctcgggtacataagatcatttaat
gttcctctcatgctcttgggtggtcaaggtcacactcttggaaatgttgcacgttgctgg
tgctatgagacagcagttgcggttggaaaagtaattgacgacgatctcgataccaatgtc
tccgatgcgtgttttgccccaggttatcaacttcatattgagccgaaccgcatgaagaat
ttaaacacagacgaatatattgcaaaaataaagaagacattactaaaccaactttcgcaa
gtgatacacgcacctagtgtgcagtttcaagacactccaccaatcagtcaagttacagaa
gcagtggaagaggacatggagacgagataa

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