KEGG   Brassica napus (rape): 106440585
Entry
106440585         CDS       T04128                                 
Name
(RefSeq) histone deacetylase 7
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106440585
   03083 Polycomb repressive complex
    106440585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106440585
Enzymes [BR:bna01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106440585
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106440585
   HDAC complexes
    Sin3A-HDAC complex
     106440585
    BRAF-HDAC complex
     106440585
    REST complex
     106440585
    SHIP complex
     106440585
    MiDAC complex
     106440585
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106440585
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106440585
  Chromatin remodeling factors
   NuRD complex
    106440585
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106440585
NCBI-ProteinID: XP_048638595
LinkDB
Position
A6:10696410..10698633
AA seq 399 aa
MASLASGPDGTKRRVSYFYEPTIGVGNGRESQQIRTTHNLIGSYYLPRYMDIIRPRAAQP
SDFTKFHSPEYISFLSSVTRRLKSATDPSFKRFNLDAWDSPVFIGLFEYCRLYAGGSICA
AEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYHHG
EAVQEAFHKTDRVMTLSFHNSGDQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFTTLFV
PIIGKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRTFNVPLMLLGGQG
HTLGNVARCWCYETGIAVGKELNDDCPMIADDDCFAPDYKLHIEPNHMENLNTDGDIEKI
KKTLLKQLSQVIHAPSVQFQDTPPISQVTEEAEEDMETR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcgagcttggcttcgggtcccgacggaacgaaacggcgcgtgagctacttctacgag
ccaacgatcggagttggaaatggacgagaatcccaacagatccgtacgactcacaacctc
atcggcagctattacctcccccgctacatggatatcatccgccctcgcgctgcccagcct
tcagatttcactaaattccactcgccggagtacatatcattcctcagctcagtcactcgc
cggttgaaatccgcgacggatccttccttcaagcgcttcaacttagacgcgtgggactcc
cctgtcttcattggcctcttcgaatattgccgtctctacgccggtggttctatttgcgcc
gccgagaaactgaaccgacacgaagctgatatcgccatcaattggtccggcgggatgcac
cgtgccaagatagataaggcttgtggctttggctacgtcaacgacgttgttcttgggatc
ctcgagttgcttaaggtcttcaagcgagtactctacatagatattggctatcaccatggg
gaagcagtacaagaagcattccacaaaactgatagagttatgactctttctttccacaac
tctggggaccaaagaagaggagatataacggactacggggtaggaaagggagaatactat
tctctaaatgcaccactgaagaatggtctggacgatgcaagtttcaccactttatttgta
cctattatcggcaaggctatggaggtttatcaaccagaagcaattgttcttctgtgcggc
cctgattcattatctggtgatgcgttgggtaaattcaacttgactgtcaagggtcatggt
gcttgtctcgggtacataagaacatttaatgttcctctcatgctcttgggtggtcaaggt
cacactcttggaaatgttgcacgttgctggtgctatgagacaggtattgcggttggaaaa
gaactcaacgacgattgccctatgattgcggacgacgattgttttgccccagattataaa
cttcatatcgagccaaaccacatggagaatttaaacacagacggagatattgaaaaaata
aagaagacattactaaagcaactttcgcaagtgatacacgcacctagtgtgcagtttcaa
gacactccaccaatcagtcaagttacagaagaagcggaagaggacatggagacgagataa

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