Brassica napus (rape): 106440894
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Entry
106440894 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106440894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106440894
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106440894
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
106440894
NCBI-ProteinID:
XP_013738116
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Position
A3:27133831..27136425
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AA seq
461 aa
AA seq
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MEQKMESVSDLGKLFIGGISWDTDEERLREYFSKYGDLVESVIMRDRTTGRARGFGFIVF
ADPSVAERVILEKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISSSPSQHGGGSNRTK
KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK
TFHELNGKMVEVKRAVPKEPSSSSALPLAANRSPLLGGYGGNNYGVVVPNRPSGNNSYFN
SFAPGYNSNNIGRFSPIGSGRNAFSSNFGLGLNQELSLNSSFDGNTTLGYNNRIPGSQYF
NNASPNRYNNSPIGFNRGDSAYNPSNRDLLWGNRTDSSGPGWNLGVSVGNNRGNWGLSDA
NGYGRSFGTSSGLSALPFSGSNNNNNTNGFDGSIGEMYRGNSVYSDSTWQQTMPHQSANE
LDGLSRSYGFGFDNVASDPSGNASEGYPRSYSVGGNRGIEA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaatctgtatcggatctggggaagctcttcattggcgggatctca
tgggacacggatgaagaacggcttcgagagtattttagcaagtacggtgatttggtcgag
tccgtgatcatgcgtgaccgtaccacgggacgtgcacgtggctttggcttcatcgtcttt
gcagatccttctgttgcggagagagtcatcttggagaaacacatcatcgatggccgcacg
gtggaggcgaagaaagctgtgccacgtgacgaccagcaagtgctgaaacgccacgcgagt
ccaatgcaccttatctcctcatcacctagccaacacggtggtggcagcaatcgaaccaag
aagatcttcgttggaggtttaccgtctagcatcaccgaagccgagttcaagaactacttt
gatcagttcggtacgatcgcagacgttgtggtgatgtatgatcacaacacgcagaggcca
cgtggctttggattcatcacttttgattcagaggagtctgttgacatggttcttcacaag
acgttccacgagctaaacggcaaaatggtcgaggttaaaagagcagtgcctaaggagcct
tcttcctcctcggctcttcctcttgctgctaaccgaagccctcttctcggtgggtatggt
ggtaacaactatggagtagtagtacctaataggccatctggtaataatagctacttcaat
agctttgctcctggttataatagtaacaacataggtcggtttagtcctattggtagcggg
agaaacgctttctctagcaactttggtcttggtttgaatcaagaactgagtttgaactct
agctttgatggaaacaccactcttgggtataataaccgtatccctgggagccaatacttc
aataacgcttcaccaaaccgttacaacaactctccaataggattcaacagaggcgactct
gcttacaacccgagcaatagagacttgttgtggggaaacagaactgactcttctggtccg
ggttggaacttgggtgtctctgttggtaacaatagaggaaactgggggctttctgatgct
aatggctatgggagaagctttgggacaagttctggactttctgcgttaccattctctggt
agtaacaacaacaacaatacaaacggttttgatgggtctataggggaaatgtacagaggg
aactcggtttatagcgactcaacgtggcagcagacgatgcctcatcagtctgctaatgag
ttagacggcttgtctcgctcttatgggtttggttttgacaatgtagcatcagacccatct
ggtaatgcctctgaaggttacccaagaagctacagtgtcggaggaaatagaggtattgaa
gcatag
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