Brassica napus (rape): 106441459
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Entry
106441459 CDS
T04128
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106441459
03021 Transcription machinery [BR:
bna03021
]
106441459
Transcription factors [BR:
bna03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
106441459
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
106441459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
KRAB
Motif
Other DBs
NCBI-GeneID:
106441459
NCBI-ProteinID:
XP_013738730
UniProt:
A0A816R6W7
LinkDB
All DBs
Position
C1:12262902..12265215
Genome browser
AA seq
460 aa
AA seq
DB search
MATSADPAPTKKSRNSRKALKQKNEIVATETPPSPVSAKAKSAKSFEKDLLEMQTMMEKM
KIEKDKTEELLKEKDEILRRKEEELVTRDAEQEKLKTELKKLQKMKEFKPNMTFACGQSL
TQAEQEKMNKKKKKKDCPETKRPSSSYILWCKEQREEVKKQNPEADFKETANILGTKWKS
LSAEEKKPYEERYKVEKEAYLQVIAKEKRETEAMKLLDDEQKQKTAMDLLDQYLQFVQEG
EQDIKKKSKKEKDPLKPKHPISAFLVYANERRAALRQENKNVVEVAKMTGEEWKKLSDKE
KAPYEEVAKKNKETYLQAMEEYKRTKEEDAMSQKKEEEELLKLHRQEALQLLKKKEKTDN
LIKKEKETKKKKKNENVDPNKPKKPASSFFLFSKDARKALTEERPGTSNSTVTALISVKW
KELGEEEKQSYNNKAAKLMEAYKKELEDYNKKSAAATSSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagcgcagatccagctccgacgaagaaatcgaggaacagccgcaaggcgttg
aagcagaagaacgagatcgtggcgacggagactccgccgtcgccagtctccgccaaggcg
aaatcggcgaagtcgttcgagaaagatctgctggagatgcagacgatgatggagaagatg
aagatcgagaaggataagacggaggagttgcttaaggagaaggacgagattctgaggagg
aaggaggaggagcttgtgacgagagacgctgagcaggagaagctcaagacggagctcaag
aagcttcagaagatgaaggagttcaaacctaacatgacgtttgcttgtggccagtctctc
acacaagctgagcaagaaaagatgaacaagaagaagaagaagaaggattgtcccgagacg
aagcgaccatcgtcatcatacatactgtggtgcaaggagcaaagggaagaagtcaagaag
cagaaccctgaagctgacttcaaggagactgcgaacattcttggcactaaatggaagtct
cttagtgcggaagagaagaagccgtacgaggagaggtacaaggtggagaaggaagcttac
ctccaggtcattgctaaggagaagcgtgagacagaggccatgaagcttctggatgatgag
cagaagcagaagactgctatggatttgcttgatcagtatctccagtttgtgcaggaaggt
gaacaggacatcaagaagaagagcaagaaggagaaggatcctctgaagccaaagcatccc
atatctgccttcctggtttatgctaacgagaggagagctgctttacgccaagagaacaag
aacgttgtagaggtcgcaaagatgaccggtgaagagtggaagaagttgtcggataaagaa
aaagcaccctacgaagaggtggcaaagaagaacaaggagacatacctgcaagcaatggag
gagtacaagaggacgaaggaagaagacgccatgagccagaagaaagaagaagaggagctc
ttgaaactccacagacaggaagctctccaactgcttaagaagaaggagaaaaccgacaat
ctgatcaagaaggagaaagagaccaagaagaagaagaagaacgaaaacgttgacccaaac
aaacccaagaagcctgcttcgtcattcttcctcttcagcaaagacgcaaggaaagctttg
acagaagaacgtccagggacgagcaactcaacggtcaccgctctaatctcagtgaaatgg
aaggaattgggtgaagaagagaagcaaagttacaacaacaaagcagcgaagttgatggaa
gcatacaagaaggaacttgaagattacaacaagaagagtgctgcggctacgagcagtagt
tag
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