Brassica napus (rape): 106441490
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Entry
106441490 CDS
T04128
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106441490
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106441490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_2nd
Motif
Other DBs
NCBI-GeneID:
106441490
NCBI-ProteinID:
XP_048626675
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All DBs
Position
A3:complement(3053253..3061097)
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AA seq
1042 aa
AA seq
DB search
MVEPVNSSLGKMLLEEISPVVMVLCTPLVEETFLKNGLSFVETLKPFCNFSNIDVPVRTS
GDQLYRLKKFTLRLFNASDIKQPNVEVAKQRLEHVITEAGEKVFDDLKSDPPQITDILSN
PESEIAPTWFQYYNKELIRTLSFLDHEAFDHPVACLLVVSSKDEQPVNKFVDLFNTNRLP
SLLNDGVMDPKILKNYLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGNVE
HQANPWASFKSSVSADKLGCALTGDDIVEIKDLMQEFASRHIIPYMEQKVRDLNQQISAT
RKGLRNQIKNLWWRKGKDDVPDSAKGSMYTFSSTESQIRILGDYAFMLHDYELALSSYRL
ISTDYKLDKAWKHYAGVQEMMGLAYFISDQSKKEAEYCMENAFSTYLKLGRSGFQNATRC
GLWWAEMLKAGDQYKEAASAYFRICGEEPLHAAVMLEQASYCFVLTKPAMLNKYGFHLVL
SGDHYKNCDQVSHAIRTYRSAISVYESTTWSHIKDHVHFHIGRWYALVGMHDVAVRNMLK
VLDCGNQSKATQEIFLRDFFEIVKKTGMKHEVVGLQLPFINMSSLQVIYEDHRTYASQAS
VLVQESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVAGESVKVDLEFRNPL
LISTSITSVSLICELTSNSDDLKVDKDPSSISLGTESSAEHNQGTTSGFSSFTLSEVDLT
LGGGEKKLVRLTVTASEEGILKIVGVRWRLSGSVVGVHYFQSAPGKAKTNKGRRKNKLTP
TDALKFLVIKSLPRLLGSIDHLPEKLYAGDLRYLVLELKNKSEFPIKNLKMKISHPRFVN
PGNHEEEVTTEFPDCLKKGHEQNFVQSETSSVFSFPKDVSLQGDKSLRWPLWLRAAIPGT
ISLYFTIYYEMENVSSIMKYRTLRMHYNLKVLPSLETSFEITPSPSKLQECLVRMDILNR
ANSDSFQIHQLSTVGCRWGISLLERVDTILPSKSLLPGQALSCHFMIKQNPAIHQEWQIY
QRFCLTIHVTIESGAQTRYRGP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcatcgcttgggaaaatgctcttggaagagatcagtccagtt
gtcatggtactctgcacgcctcttgttgaagagactttcctcaagaatggactatccttt
gtggaaacgctgaagccattctgcaacttcagtaatatcgatgttcctgttaggacctca
ggcgatcagctttatcggctgaagaagtttacgctcagattgtttaatgcctcagatatc
aaacaaccaaacgtggaggttgcaaagcaacggctagagcatgttatcactgaagctggg
gagaaagtttttgacgatttgaaatctgaccctcctcaaattactgatatactctctaat
ccagagtctgagattgcacccacatggtttcagtattacaataaggaactcatccgtaca
ctgtcctttttagaccatgaggcttttgatcatcctgtggcttgtctcttggtcgtttca
tcaaaagacgaacaacctgtaaataaatttgtagatcttttcaacaccaatagattacct
tctttgcttaatgatggtgtaatggacccaaagattttgaagaattacctcttggtgcat
gataatcaggatgccacaacagagagaacgtctaaagttctgtctgagatgagaagtaca
tttgggaacaatgagtgcaacttactttgcactaattcatctaaagaggggaacgtggaa
catcaggctaatccctgggcttcatttaaatcaagtgtttcggccgacaaacttggatgt
gctctcactggcgacgatatcgtggagatcaaagatctgatgcaagagtttgcatcgagg
catataattccttacatggaacagaaagttcgagatcttaatcaacagatttctgcaaca
aggaaaggacttagaaaccaaataaaaaacttatggtggagaaaaggaaaagacgatgtt
ccggattcagccaaaggttctatgtatacatttagctccactgaatctcaaattagaatt
ttgggtgactacgccttcatgttgcatgattatgaacttgcattgtcaagctatcgctta
atatcaaccgattacaagctcgataaagcttggaagcactatgctggtgttcaggaaatg
atgggacttgcatatttcatctcagaccagtcaaaaaaggaagctgagtactgcatggaa
aatgcattcagcacttatctgaaacttgggaggtctggctttcaaaatgctacgagatgt
gggctctggtgggcagagatgctaaaagctggagaccagtacaaagaagctgcttctgct
tacttccgcatatgtggagaggaaccattacacgccgcagtcatgttagagcaagcttct
tactgcttcgtgttaactaagcccgcgatgttaaacaagtatggatttcatctagttctc
tcaggagaccactataaaaactgtgatcaggttagccatgcaattcgtacatatagaagt
gcaatctctgtttatgaatcaactacatggagccatatcaaagaccatgtacattttcat
attggacggtggtacgcacttgttgggatgcatgatgttgcagttagaaatatgctcaaa
gtactggactgtggcaaccaatccaaggcaacccaagagatttttctcagagactttttc
gagattgttaagaaaactggaatgaagcacgaggtggtgggacttcaactaccatttatt
aatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagcttct
gttcttgtacaagagagcatctggcagtcactggaggatgatatcattccatcattaaat
tctggcaagtcaaactggctggaattacagtcaaagctactaccaaagaaatacaaggaa
tccaatgtttgtgtggctggagagtcagtgaaagtggatctggagtttaggaatcccttg
ctaatctctacttctataacaagcgtatctctcatctgtgaacttacctcaaattctgat
gacctaaaagttgataaagacccaagtagcataagcttggggaccgagagttccgcagaa
cataatcagggtacaacatctggtttctcttctttcactttgtctgaagtggacttaaca
ttaggcggaggcgagaaaaaactggtgagactcacggttaccgccagtgaagaaggtatc
ctcaaaatagtcggtgtaaggtggaggttgtctggttctgttgtaggtgtgcattacttc
caatctgcccctggaaaggcaaaaactaacaagggaagacggaaaaacaaacttactccc
actgatgccttgaaatttttggtcatcaagagtctacccaggcttttgggttcaattgat
catctgcctgagaaattgtatgctggagatctacgttatcttgttttagagttaaaaaat
aagtcggaattcccgataaagaatcttaaaatgaagattagccatccaagatttgtaaat
cctggaaatcatgaagaagaggtaacaacggagtttccagattgcttaaagaagggccat
gaacaaaattttgtgcagagtgaaacgagtagtgtattttcatttccaaaggatgtgtca
ctgcaaggagataaatctttgaggtggcctctctggcttcgagctgccatcccaggaacg
atatctttgtatttcacaatatactatgagatggaaaatgtatcaagcatcatgaagtat
cgcaccctaaggatgcattataatttaaaggttttgccatctctagagacctcgttcgaa
atcactccctctccatcaaagttgcaagaatgtcttgtgcgtatggatatactgaaccgt
gcgaattcagattctttccaaattcatcagttgtcaacagttgggtgtcggtggggtatc
tccttacttgagcgtgttgatacaatcttaccttccaagtctctgcttcccgggcaagct
ttatcatgtcacttcatgattaagcaaaatccagcaattcatcaggagtggcagatatac
caaagattctgtctcaccattcatgtcacaatagaatcaggagctcaaacccgctatcgt
ggtccctag
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integrated database retrieval system
