Brassica napus (rape): 106441492
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Entry
106441492 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106441492
00071 Fatty acid degradation
106441492
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106441492
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106441492
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106441492
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106441492
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106441492
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106441492
Exosomal proteins of breast cancer cells
106441492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
UPF0150
Motif
Other DBs
NCBI-GeneID:
106441492
NCBI-ProteinID:
NP_001302548
UniProt:
Q96538
LinkDB
All DBs
Position
C1:complement(12279641..12284128)
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AA seq
667 aa
AA seq
DB search
MTQQLEKFIFQVEEGREGSDGRPSVGPVYRSVFAKDGFPEPIEGMDSCWDVFRMSVEKYP
NNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSCGVEEQAKCGIYGANSPEWII
SMEACNAHGLYCVPLYDTLGAGAVEFIITHSEVSIVFVEEKKISELFKTCPKATEYMKTV
VSFGGVTREQKEAAETFGLVIYAWDEFLKLGEGKQFDLPIKKKSDICTIMYTSGTTGDPK
GVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGF
WRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQQKLAAGGFFKKFMFDSAFSFKYGHM
KKGQSHVEASPLCDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYG
LTESCAGTFVSLPDRLDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLF
SGYYKREDLSKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIY
GEVQAVDSVWVYGNSFESFLIAVANPNQHILEKWAAENGVSGDYNALCQNAKAKEFILGE
LVKMGKEKKMKGFEIIKAVHLDPVPFDMERDLLTPTYKKKRPQLLKHYQCVIDEMYKTTN
ESLASRK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagctagagaaattcatcttccaagtcgaggaagggagagaaggtagcgat
ggaagaccatccgttggacctgtgtaccgcagtgtcttcgccaaggacgggttcccggag
ccgatcgaaggaatggatagttgctgggatgttttccgcatgtctgttgagaagtatcca
aacaatccgatgcttggccgccgtgagattgtagacgggaagccggggaagtatgtatgg
caaacgtaccaagaagtctacgacattgttataaagctgggaaactctctccgaagttgt
ggagttgaggagcaagcgaaatgtggtatctatggtgctaattctcccgagtggatcata
agcatggaggcatgtaatgcacatggactctattgtgtccctctgtatgatacactaggc
gctggtgctgtggagttcattattacccattctgaggtttcaattgtctttgtggaggag
aagaagatctctgagttatttaagacatgcccaaaggccacagagtacatgaagaccgtt
gtgagcttcggtggtgtcacacgtgaacaaaaagaagcagctgaaacttttgggttggtc
atatatgcttgggatgagtttttgaagctgggcgaaggaaagcaatttgatcttccaatc
aaaaagaagagtgacatttgcacgatcatgtatactagtggaaccactggtgatccaaag
ggagtgatgatatctaacgaaagcattgttacccttatcgctggagtgatccgtctactg
aaaagcgctaacgaagccttgactgtgaaagatgtgtacctttcttaccttcctctcgcc
cacatctttgaccgagttatcgaggagtgttttatccaacatggtgctgcaattggcttc
tggcgtggggatgtcaagctgttgatagaagaccttggcgagcttaaaccaactattttt
tgcgctgtacctcgtgtgctagatagagtttactcaggtcttcagcagaagcttgctgct
ggtggattcttcaaaaagtttatgtttgattctgcattttcctttaaatatggacatatg
aagaaaggacagtctcatgtagaggcctctccattatgtgacaaacttgtattcagcaag
gttaaacaagggctcggaggcaacgtgaggatcattctatcgggagctgctcctctcgct
agtcacgtagagtcatttctaagagtggtggcttgctgtcatgttctccaaggatacggt
ctaaccgagagctgtgctgggacttttgtctcgctgccggaccgactggacatgctcggg
acagttggaccaccagtgccaaacgtggatatacgccttgaatctgtacccgagatggaa
tatgatgctcttgcaagtactccacgtggtgaaatctgcattcggggaaagacccttttc
tctggatactacaaacgtgaagacctctcaaaagaggttcttattgatggatggctgcac
acaggtgatgttggggaatggcaaccaaatggaagcatgaagataatcgacaggaagaag
aatatctttaaactctcacaaggagagtatgttgcggtcgagaacttggaaaacatctat
ggtgaagtacaagcggttgattccgtgtgggtgtacgggaacagctttgaatccttccta
atcgcagtcgccaatccaaaccagcatatccttgagaaatgggctgcagaaaacggtgtg
agcggtgactacaacgctctctgtcaaaacgcaaaggcaaaggaattcatcctcggagaa
cttgtgaaaatgggcaaagagaaaaagatgaaggggttcgagatcattaaggcggttcat
ctagacccagtgccgtttgacatggaacgcgatcttcttactcccacttacaaaaagaag
aggcctcaattgctgaaacactaccagtgtgtgatcgatgaaatgtacaagaccacaaat
gagagcttagcttccagaaagtaa
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