Brassica napus (rape): 106441917
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Entry
106441917 CDS
T04128
Name
(RefSeq) pectinesterase 5
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106441917
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106441917
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Motif
Pfam:
Pectinesterase
PMEI
Motif
Other DBs
NCBI-GeneID:
106441917
NCBI-ProteinID:
XP_013739118
UniProt:
A0A816I3W8
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Position
C3:complement(16111508..16113805)
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AA seq
596 aa
AA seq
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MIGKVVVSVASVLLLVGVAIGVVVIINKNGNTPLSPQMKAVQGICQGTSDKASCVKTLEP
VKSDDPNKLIKAFMLATQDALTKSSNFTGKTEGELGSSISPNNKAVLEYCKKVFLYALED
LGTILEEMGEDLNQIGSKIDQLKQWLTGVYNYQTDCLDDIQEEDLRKTIGEGIASSKILT
GNAIDIFHTVVSAMAKLNVKVDDFKNMTSGVFSPSDKGAAPVNKETPPVVDTPVADPDGP
SRRLLEDIDETGLPTWVSGADRKLMANAGRGRRRGGGGARIRANFVVAKDGSGQFNSVQQ
AVNACPDKNPGRCIIYIKAGIYREQVIIPKKKNNIFLFGDGARKTVITYNRSVGLSSGTT
TSLSGTVQVESEGFIAKYIGFKNTAGPNGHQAVAIRVNGDRAVLFNCRFDGFQDTLYVNN
GRQFYRNCVISGTVDFIFGKSATVIQNSLIVVRKGNKGQYNTVTADGNEKGLAMKIGIVL
QHCRIVPDRKLAAERLTVESYLGRPWKQYSTTVIMNTEIGDLIRPEGWRVWDGENFHKSC
RYVEYNNRGPGANTNRRVNWAKIARTAGEVNQFTVANWLSPVNWIQQANVPVTLGF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaaagttgttgtctcggtggcctctgttctcctattggtcggagtagccata
ggagtcgttgtcatcattaataaaaatggtaacactcccttgtctcctcagatgaaagcc
gttcaaggtatttgccaaggtacttccgacaaagcctcatgtgtcaaaactcttgagccg
gtcaagagcgatgacccgaacaagctgatcaaggccttcatgcttgctacacaagatgca
ctaaccaaatcatcaaacttcacgggtaaaaccgaaggagaattgggttcgagcatctcg
ccaaacaataaagccgttcttgaatactgcaagaaagttttcctgtacgcgcttgaggat
ctcggtaccattcttgaggaaatgggtgaagatcttaaccagatcggtagcaaaattgac
cagcttaaacaatggttaaccggtgtctacaattaccaaaccgattgtcttgacgatatt
caggaagaagatttgagaaagactattggagaaggcattgcaagctccaagattctcact
ggcaatgctatcgatatcttccataccgtcgtcagcgcgatggccaagcttaacgtcaag
gtcgatgatttcaagaacatgacaagcggagtcttttctccttccgacaaaggagcagct
cccgtcaacaaagaaactcctcctgtcgttgatactcccgtggctgacccagatggtcct
tctcgtcgtctccttgaagacattgacgagaccggactcccaacatgggtttcaggtgca
gacaggaagctcatggcaaatgctggacgtggccgaagacgcggcggtggtggtgctaga
atcagagctaactttgttgtggccaaggatggaagcggacagtttaactcggtccaacaa
gctgttaacgcttgtcccgataaaaaccctggccgatgcatcatctacattaaggccggt
atctacagagagcaagttatcatccctaagaagaaaaacaacatcttcctgttcggagat
ggtgcaagaaagaccgttatcacttacaacagaagtgttggtctcagttctggaaccacc
acttctcttagtggcacagtccaggtcgaatctgaaggattcatcgctaaatatatcgga
ttcaagaacacagccggtccaaatgggcaccaagccgtggccatccgagtcaatggagac
cgcgctgtcctcttcaactgtagattcgacggattccaagacactctatacgtcaacaac
ggccgtcaattctacagaaactgtgtcatctcaggaacagtcgatttcatcttcggaaaa
tcagcaaccgttatccaaaactcactcatcgtcgtccgtaaaggaaacaagggacaatac
aacaccgtcacagccgatggaaacgaaaagggattagccatgaaaatcggtatcgtcctc
caacactgccgcatcgttccggacaggaaactagcggcagagaggttgaccgtagagtca
tacttgggaaggccatggaagcaatactctaccactgtgatcatgaacactgagatcggt
gatttgattagaccagaaggttggagagtgtgggatggtgaaaatttccacaagtcatgt
aggtacgttgaatacaacaaccgtggaccaggagctaacacgaataggagagttaactgg
gctaagatcgctaggactgcaggtgaagttaatcagttcactgtggctaactggttaagt
cccgttaactggattcaacaagctaacgttcctgtcacgcttggattttaa
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