Brassica napus (rape): 106442226
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Entry
106442226 CDS
T04128
Name
(RefSeq) coatomer subunit beta'-3-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106442226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106442226
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106442226
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106442226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
WD40_like
WD_LRWD1
Beta-prop_Nup120_160
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
106442226
NCBI-ProteinID:
XP_048632424
LinkDB
All DBs
Position
A3:complement(18039714..18047203)
Genome browser
AA seq
919 aa
AA seq
DB search
MPLRLDIKKKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYALERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGASFEVTDGERLPLAVKDLGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFNKNFQ
ERKSIRPTFSAEKIFGGSLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWAESGDLVAI
ASDTSFYILKFNRDLVSSHFASGRQTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYATDLSGLLLLYSSLGDAEGMSKLASLA
KEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVARSVEANAVEARGVYAAAENYATQADQPFITLVEAF
RNLQVEAEEPFENGDGDHEVAEENGDAENEGGEEEENEEEVNQEEGVVDEDSTDGSAVLV
NRSEGEEEWGTNSKDNQSA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactcgatatcaagaaaaaatttgctcaacgatcagagagagtgaaatct
gtggatctgcatcctacagagccatggattctagcaagtttgtattctggaaccgtctgt
atctggaactaccagactcagacgataacaaaatctttcgaggtcaccgaattgccagtt
aggtcggccaagtttatcccacgcaagcaatgggttgtggcaggagccgatgatatgtac
atccgtgtatacaactacaacacaatggacaaggttaaagtgtttgaggctcattccgat
tacattaggtgtgttgctgtccatccgaccctcccatatgtgctgtcatcttctgatgat
atgctcataaagctctgggactgggaaaatggttgggcctgtactcagatctttgaggga
cattcgcactatgtgatgcaagtggtatttaatccaaaagacaccaacacttttgccagt
gcatcgcttgaccgttccataaagatatggaatcttggctccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgcgtagattatttcacagggggtgataagccc
tacttaattactggctctgatgatcatactgctaaggtatgggactatcaaactaaaagc
tgtgtccagacgctggaagggcacacccacaatgtatctgcagtatgtttccatccggag
cttccaataatactcacaggctctgaggatggcactgttcgcatttggcacgccacgact
tacaggctagagaacacattgaattatgctctcgagagagtctgggccattggttacata
aaaagttcgcgcagggttgtgattggatacgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacagtagcggaaaaattatatgggcgaagcataat
gaaatccaaactgcaaacatcaaaagtattggtgccagtttcgaggttactgatggagaa
agacttcccttggctgttaaagatctggggacctgtgatctttatccacaaagcttgaag
cataacccaaacgggaggtttgtcgtagtctgcggggatggagagtacataatctacaca
gctttggcttggagaaataggtctttcggttctggactggaatttgtttggtcatccgag
ggggaatgtgcagttcgagagagctcgtcaaagataaagatattcaataaaaatttccag
gaaaggaagagtattcggcctactttctcagctgagaagatttttggaggatccttgtta
gcaatgtgttcaagtgatttcatctgcttttatgattgggctgaatgtaggctgattcag
cgaattgatgtcacagtaaagaatctttattgggcagaaagtggtgatttagttgccatt
gctagtgatacgtcattctacatcctgaagttcaatcgtgacttggtttcctcccatttt
gctagtggaagacaaactgatgaagaaggtgttgaggatgcttttgaggttctccatgag
aatgatgaacgtgttaggacaggtatatgggtcggggactgcttcatttacaacaactct
tcttcgaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgt
ccaatgtatttgttaggctatattgccaaccaaagtcgggtctacttggtagacaaagaa
ttcaatgtcataggatataccctgctgcttagcctgattgaatacaagactcttgtgatg
cgaggtgatttggacaaagccaatgaaattttacctacaattcctaaagagcagcataac
aatgttgctcacttcttggagtctcggggaatgattgaagatgctttagaaattgcgacc
gatcctgactacagatttgagctggccatacaattgggtagacttgaaattgccaaggaa
atcgctgaagaagtgcagagtgagtctaaatggaagcagttgggagagttagccatgtct
tctggcaagctccaactggccgaggattgcatgaagtacgctacggatttgagtggtttg
ctactactatattcttctttgggagatgctgaagggatgtcaaagcttgcatcccttgct
aaggagcagggaaagaacaatgtcgcctttctttgcttattcatgctgggtagattggaa
gattgtctgcagttattggtggagagcaaccggataccagaagctgctctgatggcacgt
tcttatcttccaagcaaagtttcagagatagtagctctctggagaaaagatctaagcaag
gttaattcgaaagcagcagaatctttggctgatcctgaagagtacccaaatctttttgag
gattggcaagttgctcgttctgttgaagctaatgctgtagaggcgaggggagtttatgct
gctgcagaaaattatgcaacccaggccgatcaacctttcattaccctcgtggaagccttc
agaaacctgcaagttgaagcagaggaaccatttgaaaatggagacggagatcacgaggta
gcagaagaaaatggtgatgcagagaatgaaggaggtgaagaggaagagaatgaagaagaa
gtgaatcaagaagagggagttgttgatgaagattctacagatggtagtgctgtacttgtt
aatagaagtgagggtgaggaagagtggggtacgaatagtaaagacaaccaatcagcctaa
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integrated database retrieval system
