Brassica napus (rape): 106442448
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Entry
106442448 CDS
T04128
Name
(RefSeq) RING-H2 finger protein ATL11
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106442448
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106442448
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106442448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
UBZ_FAAP20
zf-Nse
T3SS_NleG
FANCL_C
zf-RING_Vps41
RINGv
Prok-RING_1
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
106442448
NCBI-ProteinID:
XP_048604405
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Position
C2:complement(22646443..22650013)
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AA seq
365 aa
AA seq
DB search
MNLLNCTITGHHGSVLQLHLFLLLLSGHASAQATHVESDMYEKSYRLDPTMKILMLVMAS
VFFTLGFSSISIRRWIERITGMNNTHSVDAGGNWLSLSYPQARGLEASVIENFPTFQYST
VKTLKINKEALECPICLNEFEDAEILRLVPKCCHVFHTDCIDAWFQSHATCPLCRANLVP
VLGESVVSIQIPGLTDDAPCSELTGDRNTVLGSPDARLIDSVALTCNQSMPRRSLSTGWN
LAEIFTTSQHEGNLDRFTLRLPEDIHNKLVHRSHSKGHVAFPHMMSSSSGYRTRSLENDA
NYFYYERFDQDGRLDRRPFSITPPYRTCSMKSPFDWFFLEKNNIGERSSDHLRSGHDNSS
GDQVV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttctcaactgtacaatcactggtcatcatggttcggtattacaactacacctc
tttctcttactcttatccggccatgcttcggctcaagccactcatgtcgagtcagatatg
tatgaaaaaagctatcggttggacccaaccatgaaaatactcatgctcgtcatggcaagc
gttttcttcactctcgggttttcctccatatctatccgtaggtggattgagcgaatcact
gggatgaacaacacacactccgtcgacgctggtggtaactggctttccctgagctacccg
caggcgcgtggactcgaggcatcggtcattgagaattttccgacgttccaatactcaacg
gtgaaaacgctcaagatcaacaaagaggcccttgaatgtcctatatgcttaaacgagttc
gaggacgctgaaatcttgcgtttggttcctaaatgttgccacgtgttccatactgattgt
atagatgcttggttccagtctcacgccacatgtcctctatgccgcgcaaatctcgtccct
gtactgggagaatcagttgtttctatccagatacccggtttaaccgatgacgctccctgt
tctgaattaaccggtgatcggaatacggttttgggttctccggatgcgagattgattgac
tcggtggcgttgacctgtaaccagagtatgccacgtaggtctttgtctaccggttggaat
ttagccgaaattttcaccaccagtcaacatgaggggaatctcgaccggttcacacttagg
ttaccggaagacattcacaataagctcgtgcaccggagccattcaaaaggccacgtggcg
tttcctcatatgatgagttcatcaagtgggtacagaaccagaagcctagagaatgatgca
aactatttctactatgaacggtttgaccaagatggtcggttagaccgtagaccattctcc
ataactcctccgtaccggacatgttcgatgaaatcaccgtttgactggttttttcttgaa
aagaacaacatcggtgaacgttcgtccgatcaccttcgctccggccatgataactcatcg
ggagaccaagttgtgtaa
DBGET
integrated database retrieval system