Brassica napus (rape): 106442809
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Entry
106442809 CDS
T04128
Name
(RefSeq) auxin response factor 16-like
KO
K14486
auxin response factor
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106442809
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
106442809
NCBI-ProteinID:
XP_048620606
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Position
A3:complement(28600630..28603848)
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AA seq
654 aa
AA seq
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MINVMDPMKSGSEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDHVDFKNLPI
PPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAKT
LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH
LLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGSC
GYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEFC
VKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQV
AWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF
PSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPQPSALPLS
QPLGLRNIDSRNEKGFCFLTMGTTPCNDDTESKKSHIVLFGKLILPEEQISEKGSTDTAN
TSGGSKLSSSEEGSPCSNKAHDAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLS
DMFGIQKAEMLSSVLYRDASGAIKYAGNEPFSEFLKTARRLTIVTEQGSESVVV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgtaatggatccgatgaaaagcggatcagagaaaggtttagatccacagcta
tggcatgcatgtgctggcggcatggtccgtatgccacctatgaactccaaagtcttctac
ttccctcaaggacacgcggaaaacgcttacgaccacgtagatttcaagaacctccctatc
cctcctatggttttatgccgtgtcttggccatcaagtacatggctgatcctgaatccgac
gaggttttcgccaaactgagactgatccctttaaaagacgacgatcacgactacggagat
ggtcaagaaggtaatggtttcgagactaacagcgagaagactccttcctttgccaagact
ctgactcagtccgatgctaacaacggtgggggattctcagtcccgcgctactgcgcggaa
acgatcttcccgaggctagactacaacgctgagccgcctgttcagaccattctcgccaaa
gatgttcacggagatgtatggaagttcagacatatctacagagggacgccgcgtcggcat
ctcctcactacagggtggagtaacttcgtgaaccagaagaagcttgtggcgggagactct
atcgttttcatgagagctgagagtggagatctttgcgtagggatcaggagggctaagaga
ggagggatcgggaacggacctgagtattcgcctggttggaaccctatcggtggaagctgc
ggctactcttctcttctgagagaagatgagagtaatagtttgaggaggagtaactgttct
cttgccgatagaaaaggaaaggtggcggctgagtctgtcatagaggccgccacgcttgct
attaatggaaggggctttgaggttgtgtactatcctagggctagcacgtctgagttttgc
gtcaaggcgttggatgctagggcggcgatgcggattccttggtgctcaggtatgaggttt
aaaatggcgtttgaaacagaagattcgtcgaggattagctggtttatggggactgtttcg
gctgttagtgtctctgatcctatccgttggcctaactccccttggcggcttctacaggtg
gcttgggatgagccggatctactccaaaacgtgaagcgggttaacccgtggttagtcgaa
ctggtatccaacgtgcatcccatcccactcacgtcgttttcgccgccgaggaagaagatg
aggcttcctcagcatccggattacaacaatctaatcaactcaatcccagtaccttctttc
ccaagcaaccctctcataagatcaaacccgttaagctctgttctggacaacgttcccgtg
ggtttacagggagccaggcataatgctcatcagtactacgggttatcatcttctgatctc
caccattactacttaaacagaccacctccaccaccacaaccatcagctctccctctttct
cagccattagggttgcgaaacatcgatagcaggaacgagaaagggttctgtttcttgacc
atggggacaacaccgtgtaatgatgatacagaatctaagaagtctcacattgtcttgttc
gggaagctgatactacctgaggagcagatctcagagaaagggtcaacggatactgcaaac
acgtcaggcggatcgaaactatcttcatctgaagaaggttcaccttgctccaacaaagct
catgatgcagcaggtttggagactgggcactgtaaagtgtttatggagtcagacgacgtg
ggtcgaacgttagacctgtcggttcttggctcgtacgaggagctgagtaggaaactctct
gacatgtttgggattcaaaaggctgagatgttgagctctgttctctatagggatgcgtct
ggtgccatcaagtacgcaggaaacgaacctttcagtgagttcttgaagacagctcggaga
ttgacgattgtgactgagcaaggaagcgagagcgttgtagtatag
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