Brassica napus (rape): 106442845
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Entry
106442845 CDS
T04128
Name
(RefSeq) probable CCR4-associated factor 1 homolog 5
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106442845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106442845
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106442845
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106442845
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
106442845
NCBI-ProteinID:
XP_013739936
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All DBs
Position
A5:complement(14975133..14976421)
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AA seq
245 aa
AA seq
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MTTIREIWSWNKTEEMNLVRESLRSCNYISVDTEFPGCLKETVMEASEETRYQNLRFNVD
KTKPIQLGFSLFDSEGAISGTWEVNFSDFDETEDLCNEKSIAFLKRNGLDFKRIREEGVG
IKDFFTEFTRMVKDEEDKKIINWVTFDGSYDLGYIIQSMTGRERLPDTSLGFNDTVQKLL
GLTFDVKKLAGQCKGLNSRFGLQRLADELGIRRVGEAHHAGSDSQLTARVFANINLTFFF
FFFFE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatccgcgagatctggtcttggaacaagacagaagagatgaatttggtgcgg
gaatctcttagaagctgcaattacatctctgtggacacagaatttcccgggtgcctgaaa
gagaccgtcatggaagctagcgaggagactcgttaccaaaacctgaggttcaatgtggac
aaaaccaaaccaattcaactgggtttctccttattcgacagtgaaggagcaatcagcgga
acctgggaggtcaatttctccgacttcgacgagacagaggatctttgcaacgagaagtcc
atcgccttcctcaagcgcaacgggctcgatttcaagagaatcagagaggaaggagttggc
atcaaagatttcttcacagagtttactcggatggttaaagatgaagaagacaagaagatt
attaattgggttacttttgatggatcgtacgatttaggttatataattcaaagcatgacc
gggcgagaaaggcttcccgacacgtcacttgggtttaacgacacggttcagaaactctta
gggttaactttcgacgtgaagaaacttgcgggacagtgcaaaggactcaacagccgtttc
gggttgcaaagattagccgacgagcttggcatcagacgtgtcggagaagcccatcacgct
ggctccgacagccaactgacggctcgtgtgttcgctaacataaatctcactttttttttt
ttttttttttttgaatga
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