Brassica napus (rape): 106443230
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Entry
106443230 CDS
T04128
Name
(RefSeq) oligouridylate-binding protein 1A-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106443230
03041 Spliceosome [BR:
bna03041
]
106443230
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106443230
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106443230
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
106443230
NCBI-ProteinID:
XP_048594385
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Position
A8:864812..867778
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AA seq
420 aa
AA seq
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MQNQRLKQQQQQAMMQQAMMQQQHHSLYHPSLMAPPPPPPQMEPLPSGNLPPGFDPSTCR
SVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGR
HLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFESFSAFNTCSDARVMWDQ
KTGRSRGFGFVSFRNQQDAQTAINEMNGKWISSRQIRCNWATKGATFGEDKHSSDGKSVV
ELTNGSEDGREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRV
QRDKGFGFVRYNTHDEAALAIQMGNSQPFLFSRPIKCSWGNKPTPTGTPSNPLPPPAPVP
VPGLSPMDLLAYERQLALAKMHPQAQHSLRHVNAAGASAAMYDGGFQNVAAAHQQLMYYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccagaggctgaaacagcaacaacaacaagcaatgatgcagcaagcgatgatg
caacagcagcatcactctctctatcatcctagtcttatggctcctcctcctcctcctcct
cagatggagcctttgccaagtggaaaccttcctcctggttttgatcccagcacttgccgt
agtgtgtatgcaggcaacatccatacgcaggtcactgaggttcttcttcaagagattttt
gctagcaccggccctgttgaaagctgtaagctcatcagaaaggataagtcttcatatgga
tttgttcactactttgatcggagatctgctggtttggctatcatgtctcttaacggaagg
catctgtttggacagcctatcaaagttaattgggcgtatgccaccggtcaaagggaagat
acatcaagccatttcaacatttttgttggagatctcagtccagaggtcactgatgcagca
ctgtttgagagcttttctgccttcaacacttgctccgatgcaagagtgatgtgggatcag
aaaactggacgctcgagaggctttgggtttgtttccttccgcaatcagcaggatgctcaa
actgccataaatgagatgaatggtaaatggataagtagcagacaaatcagatgcaactgg
gcgacaaaaggtgctacttttggtgaggacaaacatagctctgatggaaaaagtgtcgtt
gaacttacaaacggctcagaggacggtagagagatctcaatctcaaacgaagaagctcct
gaaaacaatcctcagtataccactgtctatgtaggaaacctcgctccagaagtaactcag
cttgatctacaccgtctgttccatacacttggcgctggagtgattgaggaggtccgtgtc
cagcgagacaagggctttggttttgtgagatataacactcacgacgaggctgctcttgct
attcaaatgggcaactctcagcctttcctctttagcagacccataaagtgctcatgggga
aacaaaccaactccaacaggaacaccctcaaacccacttcccccaccagcgccggttcca
gtccctggtttatccccaatggacctgttggcctatgagaggcaactggctctagccaag
atgcatcctcaggctcagcattctctaaggcatgtaaatgcagctggagcaagtgcagct
atgtacgatggtgggtttcagaatgtagctgcggcgcatcagcagctcatgtactatcag
taa
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