Brassica napus (rape): 106443566
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Entry
106443566 CDS
T04128
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00094
Ceramide biosynthesis
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106443566
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106443566
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106443566
Amino acid related enzymes [BR:
bna01007
]
Aminotransferase (transaminase)
Class II
106443566
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
106443566
NCBI-ProteinID:
XP_048634275
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All DBs
Position
A1:1246506..1249718
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AA seq
480 aa
AA seq
DB search
MDTNLVEMFRAGLKWFTMLLDAPSARIVLFGVRIQGHIFVEVLLGFVIVFLLSQKSYKPP
QRPLTEQEIDELCDEWVPEPLIPPITQDMRHEPPVLESAAGPHTTVDGKDVVNFASANYL
GLIGHVKLLESCTSALEKYGVGSCGPRGFYGTIDVHIDCETRISKFLGTPDTILYSYGLS
TMFSTIPCFCKRGDIIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRSTLEKIMTKNK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSLGVLGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPELLVKMKQNIALLWKGLKDIKGMSLASDPESPIVFLKLEKSSGSTKEDLLLLE
KMADRALKEESLLVVSSKKSFLDKCRLPVGIKLFVSAGHSDSDLIKASESLKRLASELLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggataccaatctggtggagatgtttagggccggtttaaaatggtttacaatgcttctg
gatgctccttcagctagaattgtcttgttcggtgtccgaatccaagggcacatatttgtg
gaagttttgttgggttttgtgatagtcttcctcctctctcaaaagagttacaaacctccc
cagcgacctttaactgaacaggaaatagatgagctatgtgatgaatgggttcctgaacct
cttataccgcctattacacaagacatgaggcatgagccaccagttcttgaaagtgctgct
ggaccgcatacaacggtcgatggaaaagacgtggtgaattttgcgtcagctaactatctt
ggactcattggacacgtgaagttgctggaatcatgcacttctgcgttggagaaatacggt
gttggttcttgtggccctcgtggattctatggcacaattgatgtccacattgattgcgag
acaagaatatctaaattcttgggcactcctgacacaatcctctattcttatggactttcc
accatgttcagcactatcccttgtttctgtaaaagaggtgatatcattgtcgccgacgag
ggtgttcactgggggatacaaaatggacttcagctttctagaagtacgatcatctacttc
aagcacaatgacatggaatctcttcgtagtactttggagaagatcatgacaaagaacaag
cgctcaaagaacttgaggcgttacattgtagctgaagctgtatatcagaactcaggccaa
atcgcacctcttgatgagatagtgaaactaaaagagaagtatcgttttcgtgttatattg
gatgaaagcaactctttgggtgtgcttggccgttccgggagaggtcttgcagagcatcac
ggtgtccctattgagaagatagatgttgtgactgcagcaatgggccacgcattagccaca
gagggtgggttctgcaccgggaatgcccgcatcatcgattaccagagacttagcagttca
ggatatgtgttctctgcttctttgccaccgtatctcgcgagtgctgccatcacagccatt
gatgtcattgatcaaaaccctgagttgttagtcaagatgaagcagaacattgctctgtta
tggaaaggattgaaagatatcaaggggatgtctctagcaagcgacccggagtcacctata
gtcttcttgaaactagagaagtctagtggttcaactaaagaagacttgcttctcctcgag
aaaatggctgatcgtgctctgaaggaagagtccttgttggttgtgagctctaagaagtcc
tttcttgataaatgccggttacctgtagggatcaaactattcgtctcagcgggacattca
gattctgatcttattaaagcatcagagtccctgaagagactcgcttcagagcttctactc
taa
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