Brassica napus (rape): 106443696
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Entry
106443696 CDS
T04128
Name
(RefSeq) PHD finger protein MALE STERILITY 1 isoform X1
KO
K26271
PHD finger protein MS1/MMD1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106443696
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106443696
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
106443696
NCBI-ProteinID:
XP_013740694
UniProt:
A0A816IYV7
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Position
C9:52918845..52922154
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AA seq
667 aa
AA seq
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MSNLIRTDLPKKRKRGESTVFRLKTFGETGHPAELNQLSFRDNLGKLLEFGHFESSGLMG
SWSFQLEVHRHPNPLYVLLFVVEEPIEASLNLRCNHCQYVGWGNHMICNKKYHFVIPSKE
TMAAFLKLEGGILVSPEKESLSHLVELQGHVLHGFFHSNGFGHLLSINGIESGSDLTGHQ
VMELWDRLCSGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQK
IYEKALESVRNVPLCLLNHHLTSLNRETPILLSRYQTLSTEPLITLSDLFMFMLHLHSRL
PRDNYMNNSRNQIISIDSTNCRWSQKRIQMAIKVVIESLKRVECRWISRQEVRDAARNYI
GDTGLLDFVLKSLGNQVVGNYLVRRSLNPVKKVLEYCLEDISNLLPSSNHELTTLQNQYQ
MGKTTTTTNGHNKITRGQVMKDLVYFYKHILMDYKGVLGPIGILNQIGMASRAILDAKYF
IKEYHYIRDTLMKTIQLDGGGKLGIFCTIAWKSHHHNNDIKMPPQECIVVNKNATMSEVY
REAERVFREIYWELRDVVVDNQREMAPWVDEMALNGNKGLVLDGNVGVMMNIEVMKYYDD
EDSKKKDKRIECECGAKEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHL
IPLSFLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctgattcgaacagatcttccaaagaagaggaagagaggagaaagtacggtt
tttaggctgaagactttcggagagacaggacatcccgctgagctgaaccagttgtctttt
agagacaaccttgggaagcttcttgagtttggtcactttgagagctccggtctcatggga
agttggtcctttcagctcgaggttcatcgtcacccaaatcctctatatgttcttctcttt
gtcgtcgaagagcccatcgaagcctctcttaacctccgttgcaaccattgccaatatgtt
ggttggggaaaccacatgatatgcaacaagaagtaccatttcgtgatcccctcaaaggaa
acaatggccgcctttctaaaactagaaggaggaatcttggtttctcccgaaaaagaaagc
ctctcccatcttgtggaacttcaaggccatgtcctccacggctttttccactccaacgga
tttggtcacttgctctcaatcaatggcatcgagtccggttccgacttaaccggtcatcaa
gtcatggagttgtgggatcgcctctgctctggtttaaaggccaggaaaatagggttgaac
gatgcatcgcacaagaaagggatggaactgaggctgctgcatggagtagcaaaaggagag
ccgtggttcggtcgttggggttaccggttcgggtcagggacatacggagtgactcaaaag
atttacgagaaggcacttgagtcggtccgcaacgtacccttgtgtttgcttaaccatcac
ctaaccagccttaaccgtgagactccaatcctcttgtcaaggtatcaaactttatccacc
gagccattgattactctcagtgatctcttcatgttcatgcttcatctccattcgcgtctt
ccaagagacaactacatgaataactcccgaaaccaaatcatctccattgatagtaccaac
tgtagatggtctcaaaaacggattcaaatggctattaaagtggttatagagtctttgaaa
agggtcgaatgccggtggatatcgagacaagaagtgagggacgcagctagaaattacatc
ggggacacgggtttgcttgacttcgtgttgaagtcgctcggtaaccaagtggtcgggaac
tatttggtccgacgtagtctaaacccggtgaagaaagtgctagagtattgcttggaggac
atatcaaatttattaccaagtagtaaccatgaactcacaacccttcaaaatcaatatcaa
atggggaagactactaccacgacgaacggacataacaagatcacaagaggtcaagtgatg
aaagacttggtatacttttacaaacacattcttatggactacaagggagtgttaggcccc
ataggcatattgaaccaaatcggaatggcttcaagggctatcctcgacgctaagtacttc
atcaaagagtatcactacatcagagatacattgatgaaaacaattcagttagatggaggt
ggcaaattaggaatattctgcacaatcgcgtggaaatctcatcatcataacaacgacata
aagatgcctccacaagaatgcatagtggtgaacaagaatgcaacaatgagtgaagtgtat
agagaggcagagagagtgttcagagagatctattgggaactaagagacgtcgtggtggat
aatcaaagggagatggctccatgggtcgatgaaatggcattgaatgggaacaaaggattg
gtgttagatgggaatgtaggagtgatgatgaacattgaagtgatgaagtattatgatgat
gaagatagtaagaagaaggataagaggatcgagtgtgaatgtggagcgaaggaggaagat
ggagagaggatggtgtgttgtgatatttgtgaagtatggcaacacacaaggtgtgttggt
gttcaacataacgaggaagttcctcgcatttttctttgtcaaagctgtgatcaacatctt
attcctctctcttttttgccttga
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