Brassica napus (rape): 106444245
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Entry
106444245 CDS
T04128
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106444245
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106444245
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106444245
03029 Mitochondrial biogenesis [BR:
bna03029
]
106444245
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
106444245
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106444245
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106444245
Prokaryotic type
Other AARSs
106444245
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
106444245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
106444245
NCBI-ProteinID:
XP_048598326
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All DBs
Position
A1:complement(9042836..9047735)
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AA seq
652 aa
AA seq
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MAVRLTLFPVTATPPSSLCSFNPLSRSPHSAYLSSSSSSLSGVLRGTSRRLAFATRSKSV
ATMAASQEFTGNLKREVEKLFDASLRITVPDGTSVETEVAASLPGKPGDYQCNNAMGLWS
IIKGKGTQFRGPPAVGQAISKNLPASEMVETCSVAGPGFVNLVLSSKWMSKSIEKMLIDG
IDTWAPTLPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVFRRNHVGDW
GTQFGMLIEYLFEKFPDTESVTETAIGDLQTFYKKSKTKFDEDPDFKEKAQKAVVRLQGG
DPIYRKAWAKICEISRTEFAKVYQRLKVELEEKGESFYNPYIANVIGELDSKGLIEESEG
ARVIFLEGFNIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIVYVTDVGQQQHFNMFF
KAARKAGWLPDSDKTYPRVDHVGFGLVLGDDGKRFRTRSSDVVRLVDLLDEAKTRSKTAL
IERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAVYLLYA
HARICSIIRKSGKDIDKLKKTEKLALDHPEERALGLHLLRFAETVEEACSNLLPNVLCHY
LYDLSERYTSFYSIHQVIGSPEEASRLLLCEATAVVMRKCFHLLGITPVYKI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaggctaacccttttcccggttacagctacaccgccgtcatctctctgctcc
ttcaatcctctttctcgttctcctcactcagcttatttgtcctcttcttcttcttctctc
tctggtgtattgagagggacgagtaggagacttgcttttgcaaccagatcaaagtcagtg
gcaaccatggcagctagtcaagagttcacggggaatctaaaacgcgaggtcgagaagctt
tttgatgcgtctctgagaataacggttcctgatggtactagtgttgagacagaggttgct
gcctctcttcctggaaagcctggagattaccaatgtaacaatgcaatgggtctatggtcc
ataattaaaggaaagggaactcagttcaggggtcctccagctgttggacaggccatttcg
aagaatctacctgcttctgagatggtggaaacttgttctgtagctggccctggttttgtt
aatcttgtactatcaagcaagtggatgtctaagagtattgaaaaaatgcttattgatggg
attgacacatgggcgcctactcttccagttaagagagccgtggttgatttttcctctccc
aacattgcaaaagaaatgcatgttggtcatctgagatcaaccatcatcggtgacactcta
gctcgcatgctcgagtactcaaaggttgaagtttttcgcagaaaccatgttggtgactgg
ggaacacagtttggcatgctcattgagtatctctttgagaaatttcctgataccgagagt
gtgactgagacagccattggagatcttcagacgttttacaaaaaatcaaagactaaattt
gatgaagatccggacttcaaggaaaaagcacaaaaggctgtggtccgtctacagggtgga
gatcctatttaccgcaaggcttgggctaagatttgtgaaatcagccgaactgagtttgct
aaggtttatcagcgccttaaagttgagcttgaagaaaagggtgaaagcttttacaacccc
tatatcgctaacgtaatcggggaattggatagcaaggggttgattgaagaaagtgagggt
gctcgtgtgattttccttgaaggctttaacatcccactcatggttgtaaagagtgacggt
ggttttaactatgcctcaactgatctgactgctctttggtatcggcttaatgaagagaaa
gctgagtggattgtatatgttaccgatgttggccagcagcaacactttaatatgttcttc
aaagctgccagaaaagcagggtggcttccagacagtgataaaacttaccctagagttgat
catgttggttttggtctcgtccttggggatgatggcaagcgatttagaactcgatcttca
gatgtagtccgcctagtagatttgctagatgaggccaagactcgcagtaaaactgccctt
attgagcgtggtaaggacaaagaatggactcccgaggagcttgaccaaacagctgaggca
gttggatacggtgcggtgaagtatgctgatctgaagaacaacagattgacaaattatact
ttcaactttgatcaaatgcttagtgacaagggaaatacagccgtttaccttctttacgct
catgctcggatctgttcaatcatcagaaaatctggcaaagacatagataagctgaaaaag
acagaaaagctagcattggatcatcctgaagaacgagcactggggcttcacttgcttcga
tttgctgagacggttgaggaagcttgcagcaacttgttgccgaacgtgttgtgtcactac
ctctacgacttatctgaacgctacacctccttctactccattcatcaggtcattggttcg
ccagaggaggcaagccgtctcctactttgtgaagcgacggctgtagtgatgcggaaatgc
ttccaccttcttggtatcacccctgtttacaagatttga
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