KEGG   Brassica napus (rape): 106444385
Entry
106444385         CDS       T04128                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106444385
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     106444385
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 106444385
NCBI-ProteinID: XP_048632804
LinkDB
Position
A3:23888821..23891330
AA seq 429 aa
MSIVEMKFTIFHYLRVLFFFFFFMALSSYSFVVRGDKSSVLIVDVRSFGARANDHRDSTK
AFVAAWDMACKSSSSSVDLIIPRGEFHVGPLRFSGPCTNVTHLTVRVKGNLKASTDLSKY
RSGGGWIEFGWINGLTLTGGGTFDGQGALAWPFNNCTTDSHCKLLPTSLKFVGMNRTIVR
RISSVNSKFFHMALVQCRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDC
VSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVKGLVVRDCKMSGTTNGIRIKTWA
DSPGLSAATNMTFQNIIMSNVTNPIIIDQSYCPFSSCSSNVPSKVKLSEIYFKNIRGSSS
SKVAVQLHCSEGMPCKKVYLENVHLYLASSSGGGSGKQQSSNGGNEAVSSSCRYVRANYI
GTQSPPPCH
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagcatagtggagatgaagtttacgatttttcattacctcagagttctcttcttcttc
ttcttcttcatggcattatcttcttacagttttgttgttcgtggagacaaaagctctgtc
cttattgttgatgtccgtagctttggtgctcgagctaatgaccacagagatagcacgaag
gcttttgtagcagcatgggacatggcgtgtaagtcatcttcaagctcggtagatcttatc
attccaagaggagagtttcatgttggtcctctcagattctctggtccttgcactaacgta
acacatctcactgttcgagtaaagggtaatctcaaggcatcaactgatctgtcaaagtac
agatcaggcggtggttggattgagtttggatggatcaacggtttaactctcaccggaggt
ggaacatttgacggtcaaggcgctttagcttggccgtttaataactgtactactgattct
cactgcaaactcctcccaacaagcttgaagtttgtggggatgaacagaacaatagtaaga
aggataagctcagtgaacagcaaattctttcacatggcattagtacaatgcagagacttc
aaagggacaagactcaacattactgctccttctgatagtcccaacactgatggaatccac
atcgaacgcagctcaaatgtctacttctcgcgttcacatatagcaacgggagatgattgt
gtgtctataggacaaggaaactctcagatcacaatcacaagtatcaaatgtggaccagga
catggtatcagcgttgggagtttagggagatatccaaatgagaaagacgtgaagggacta
gtggtgagggattgcaagatgagtggtacgactaatgggataaggatcaaaacttgggct
gattctccgggtctaagtgcagctactaacatgacttttcagaacattattatgagcaat
gtgactaatccaatcatcattgatcagtcttattgtcctttctcttcttgctcttcaaat
gtaccttcaaaggtgaagctgagcgagatatacttcaaaaacataagaggatcatcatca
tcaaaggtggcggtgcagctgcattgtagcgaaggaatgccatgtaagaaagtgtactta
gagaatgttcatctttatctagcttcttcttctggtgggggaagtgggaaacaacagagc
agcaacggaggaaatgaagctgtctcttcttcttgtagatacgttagagctaattacatt
gggactcaaagcccacctccatgtcactaa

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