Brassica napus (rape): 106444625
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Entry
106444625 CDS
T04128
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106444625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106444625
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
106444625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
106444625
NCBI-ProteinID:
XP_013741534
UniProt:
A0A078IJL7
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All DBs
Position
A3:26814016..26816348
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AA seq
313 aa
AA seq
DB search
MRPPLTGGRGGGGFSGGRGGGGFSGGRGGSSGGRGRGFGDRGRGRGMRGRGRGEPGRGRG
APGRGGMKGGSKVIVEPHRHAGVFIAKSKEDALVTKNLVPGEAVYNEKRISVQNEDGTKT
EYRVWNPFRSKLAAAILGGVDNIYIIPGAKVLYLGAASGTTVSHVSDIVGPEGCVYAVEF
SHRSGRDLVNMAKKRTNVIPIIEDARHPTKYRMLVGMVDVIFADVAQPDQARIVALNANF
FLKTGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGT
YRAPKKVKAATAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctctaactggtggacgtggtggtggtgggttcagcggtggacgtggtggc
ggtgggtttagtggtggacggggaggtagctctggaggtagaggaagaggttttggagac
cgtggacgcggcagaggcatgagaggaagaggtagaggagagcctggtcgcggaagagga
gcaccaggacgtggaggaatgaagggaggcagcaaagtgattgtggagccacacagacac
gctggagtgttcattgcaaagagtaaagaagatgctcttgttactaaaaacttggttcct
ggtgaagctgtttacaacgagaagagaatctctgttcagaatgaggatggaaccaagact
gagtacagggtgtggaaccctttccgttctaagttggccgctgctattctcggtggtgtt
gataacatttatatcatacctggtgctaaagttctataccttggtgctgcctctggaact
acagtctcccatgtatctgatattgttggacctgagggatgtgtttacgcggttgagttt
tctcacagaagtggtagagacttggtgaacatggctaagaagagaactaatgttattccc
atcattgaagatgctagacaccctactaaatacagaatgctcgtaggcatggttgatgtt
atcttcgctgatgttgctcagcctgatcaggctaggatcgtggctttgaatgcaaatttc
ttcctcaaaacaggaggtcactttgttatctcaatcaaggctaactgtatcgattcaaca
gttccagcagaagctgtgtttcagagcgaagtgaagaagctgcaacaagagcagttcaag
ccagcagagcaagtgactcttgagccatttgagcgtgaccatgcttgcgtcgttggtacc
taccgtgcgcctaagaaggtcaaggctgctactgctgcttag
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