Brassica napus (rape): 106444890
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Entry
106444890 CDS
T04128
Name
(RefSeq) DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106444890
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106444890
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Topoisomerases
106444890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
106444890
NCBI-ProteinID:
XP_013741770
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All DBs
Position
A1:9277429..9282233
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AA seq
776 aa
AA seq
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MDSEAVSKPVMHNDVDDNKPLVFKKSVVIPSTVKDGDSEDDTPLRSIISIAPEQKINGNK
GLDRSSRIIRHEESDDDEAPISSRLQKKNGNKLLVNKLQNDSKLQSKGTKVSGKRLLEKD
SSTHQSSMKKHKASSSSAKQDSAKTENLDRKRKAVVSPNETDDDDDDVPIAKRIKSDSSN
SKTPSAKLNVTKQSSTSSSKKPEVTRGASPPPKKRSKRSKKNSDYAKSSKSLRSGDGKKK
WTTLVHNGVTFPPPYQPHGTKILYKGKPVNLSPEQEEVATMFAVMRETDYYNNPLFRKNF
WSDWRKLLGKKHVIQTLDDCDFTPIYEWHLEKKQKNKEKKEKKQEQEEKYMWAIIDGVKE
KIGNYKVEPPGLFRGRGEHPKMGKFKRRIHPHDITLNIGKDAPIPECPIPGERWKEIKHD
NTVSWLAMWNDPVILRKEKYVGLSASSSQKGQSDKDKYENARKLKDHIESIREAYTKNFT
SKDVLKRQIAVATYLIDKLALRAGTDKDDDEADTVGCCTLKVDHVVCIHPNQLKFDFLGK
DSIRYENTVEVEPPVYKAIGQFKAGKSNSDDLFDEIDANKLNAHLKELMPGLTAKVFRTY
NASITLDKTLRRETKDGVDVNQKKIVYDQANKEVAIICNHQRAVTKSHGAQVKKLKDKID
ELKEGLKQLKTNLKRAKKGEAPLESSDGKKTRNITPEAWEKKITQQKMKAEKMERDMQTK
EDLKTVALGTSKINYMDPRITVAWCKRNEVPIEKMFTKTLQEKFTWAMDVEPDFRF
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggactctgaggctgtttcaaaaccagtgatgcacaacgatgttgatgataataagcct
ttagtgttcaagaaaagtgttgttataccctcaactgttaaggatggagattctgaggat
gatacacctttacgttccataatctccattgcgccagaacaaaagatcaacggaaacaaa
ggtttggataggtcaagtagaatcattagacatgaagagtcagatgatgatgaagctcca
atatcgtcaaggttacaaaagaagaatggaaataaacttctggttaataagttacagaat
gattccaagcttcaaagtaaagggacaaaggtgtctggcaagagacttctggagaaggac
agttctacacatcaatcttccatgaaaaagcacaaggcatcatcttcatctgcaaaacaa
gattctgcgaaaaccgaaaatttagatagaaagagaaaggctgtggtatcacctaatgaa
actgatgatgatgatgatgatgttccaattgccaagagaatcaagtcagattcctctaac
agtaaaacaccatctgcaaagcttaacgtaacaaaacagagttctacttcatcatctaag
aagccggaagtgacaagaggagcttctcctccgcccaagaaaaggagcaaaagatccaag
aaaaactctgattatgcaaagtcttcaaaatctttacgttctggagatgggaaaaagaaa
tggactacattggtgcacaatggtgtcacctttccaccaccttatcaacctcatgggact
aagattttatacaagggaaagccagtcaacttatctcctgagcaagaagaggttgcaacc
atgtttgctgtgatgagggagacagactattataacaaccctttatttagaaagaatttc
tggagtgactggagaaaactacttggaaagaaacatgtgatacagacgctagatgattgt
gactttaccccaatatatgagtggcatttggaaaagaagcagaagaataaagagaaaaaa
gagaaaaaacaggagcaggaagagaagtatatgtgggctattatagacggtgtcaaagag
aaaattgggaactataaggttgaacctcctgggttattcagaggccggggagaacatcct
aagatgggaaagtttaagaggcgtatacatcctcatgacatcactctaaacatagggaaa
gatgctcctatccctgaatgccccatacctggtgaaagatggaaagaaataaagcatgat
aacacagtctcatggctagcaatgtggaatgatcctgttatcttaagaaaggaaaagtat
gttggtctgtcagctagcagttctcagaaaggacaaagcgacaaggataagtacgagaat
gccaggaagcttaaggaccacatagaaagtataagagaagcttacaccaagaactttact
tctaaagatgttctaaagcgtcagatagctgtggctacctatctcattgataaattggca
cttagagctggtactgataaggatgatgatgaggcagacactgttggttgctgtacgcta
aaagtagaccatgtggtgtgcattcatccaaatcagttaaagtttgatttccttggtaaa
gattcaataagatatgagaatactgttgaagttgagcctcctgtttacaaagccattgga
cagttcaaagctggtaaatccaattcagacgatctttttgatgagatagacgcaaacaaa
ctaaacgctcatcttaaggagcttatgcctggactcacagctaaagtattccgtacatac
aatgcatccatcaccctggataaaacgttgcgtcgagaaaccaaagatggtgttgatgtc
aaccagaaaaaaatagtttatgatcaagccaacaaggaggtggccataatttgtaatcac
cagcgtgctgttacaaagtctcacggtgcacaagtcaagaaactgaaagataagatagat
gaactcaaggagggtctaaaacaacttaaaaccaacctaaagagggctaaaaagggagaa
gctccattagagagttcagatggaaagaaaacgagaaacataactccagaagcgtgggag
aagaagataactcaacagaagatgaaggctgagaagatggaacgggacatgcagacaaag
gaggatttgaaaactgtggccttgggaacgtctaaaattaattacatggatcctaggatc
acagtagcgtggtgcaaacgtaatgaagtacccattgaaaagatgttcaccaagactctc
caggagaaatttacgtgggcaatggacgtggaacctgacttcagattctag
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