Brassica napus (rape): 106444937
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Entry
106444937 CDS
T04128
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106444937
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106444937
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106444937
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
106444937
NCBI-ProteinID:
XP_013741833
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All DBs
Position
A1:9204142..9208046
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AA seq
645 aa
AA seq
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MPALTRNKKKGAKSQTPPLIKRTKSNPTPPPKKAMKSHKPPLKKQRKGVSDEKREVYNDE
EEEEEEEVSEESDEGDELGSDLFSDGDEEEEDGDEEDDIEPSDDDFLGGSDEEKGTLVSD
SDSDSDESDIEKESKAIDEERERQEQDAKDELQMNIKEQPDEFRLPTKKELEEEASGPPD
LPALQTRIKEIVRVLSNFKDLRPEGVKRKEFVEQLKADLGSYYGYNEFLIGTLVEMFPPV
ELMELIQAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPI
GATPEYLAGFYMLQSASSFLPVMALAPRENERVVDMAAAPGGKTTYVASLMKNTGIIYAN
EMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVFGPNSVDRVLLDAPCSGTGVISKDE
SVKTSKSANDIRKFADLQKQLILAAIDLVDAESKTGGYIVYSTCSIMIPENEAVIDYALK
KRDVKLVPCGLDFGQAGFTRFREHRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSNETKA
SEGDEPVETKEQAQLSSDEDDDDESIKELKKPSGANVVKNKQRIPISKANNKGKKNKNFK
TENANAEGPRKQKKKRSQWKAEIAQAREDKRKVMREKNTKEPGRR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctcacgcgtaacaagaagaagggagctaagtcgcagactcctccactgatt
aagcggactaaatcgaatcccacgcctccaccgaagaaggcgatgaagtcccataagcct
ccgttgaagaaacagaggaaaggtgtttcggatgagaagcgtgaagtttataatgatgag
gaggaagaggaagaagaagaagtgagtgaagagtctgatgaaggagatgaattgggttct
gaccttttctcagatggtgacgaagaagaagaagatggtgatgaggaggatgatatagag
ccctcggatgacgactttcttggtgggagcgatgaggaaaagggaactttggtttctgat
tctgattctgactctgatgagtcagatatcgagaaggaaagtaaagctattgatgaagaa
cgtgaaaggcaggagcaagatgcaaaagatgaattgcagatgaacattaaggagcaacct
gatgagtttcgcctaccaaccaaaaaggaacttgaagaagaggcaagtgggccaccagat
cttcctgccttgcaaactaggataaaagagattgttagagtgctgtcgaattttaaggat
ttgaggccagaaggagtcaagaggaaggagtttgttgaacagcttaaggctgatctgggt
tcttattacggctataacgagtttcttattggaactcttgttgagatgtttcctcctgtt
gaactcatggaactaatccaagcttttgaaaagcaaaggcctacttctatacgtaccaac
actcttaagactcggagacgggatctggctgatgtacttttgaacagaggagttaatcta
gacccattaagcaagtggtcaaaagttggacttgtcgtttatgattcacaagttccaatt
ggtgcaactcctgaatatttggctggtttctatatgttgcaaagtgctagttccttcttg
ccagtgatggctcttgctcctcgagagaacgagcgcgttgtggacatggctgctgcccct
ggtggtaaaacaacttatgttgcttccctaatgaagaatactggcataatatatgcaaac
gagatgaaagtacctaggcttaagtcactcactgccaatctgcatcgcatgggggtgaca
aataccatagtttgtaactatgatggaagagagctacccaaggtttttggtccgaactcg
gtagatagagtattgttggatgctccttgcagtggaaccggagttatatcaaaagatgaa
tcagttaaaacttccaaaagtgccaatgacataaggaaatttgctgatttgcaaaagcaa
cttatacttgctgcgattgatttggtggatgccgaatccaaaaccggtggatatattgtt
tactcaacatgctccattatgattcctgagaacgaagctgtaatcgattatgccttaaaa
aagagggatgtcaaactcgttccatgtggacttgattttgggcaagcaggatttaccaga
tttagagaacaccggttccaccctactttggagaaaactagacgtttctatccccacgta
cacaacatggacggattctttgtggcaaagctgaagaagatgagcaatgaaacgaaggct
tcagaaggtgatgagccggttgaaacaaaagagcaagctcagttgtctagtgatgaagat
gacgatgatgagtccattaaggagctgaagaaaccttccggagccaatgtagtcaagaac
aaacaaagaattccaatctcaaaggcgaacaacaaaggcaaaaagaacaaaaacttcaaa
accgaaaatgctaatgcggaaggacccaggaagcaaaagaagaagagatcacaatggaag
gctgaaattgcacaagctagggaagataaaagaaaagtcatgagagagaagaatactaag
gagcctgggagaagataa
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