Brassica napus (rape): 106445005
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Entry
106445005 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106445005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106445005
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106445005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
106445005
NCBI-ProteinID:
XP_013741939
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All DBs
Position
A1:9245863..9248587
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AA seq
431 aa
AA seq
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MEQKMESVSDLGKLFIGGISWDTDEERLREYFSKYGDLVESVIMRDRTTGRARGFGFIVF
ADPSVAERVIMEKHIIDGRTVEAKKAVPRDDHQQVLKRHASPMHLISSPNHGGNGGRTKK
IFVGGLPSSITEAEFKNYFDQFGKVSDVVVMYDHNTQRRRGFGFITFDSEESVDIVLHKT
FHELNGKMVEVKRAVPKEPSQASINRSSPVLGFGNNYGVVSNNSYFNSFAPGYISNNPGG
RFSPIGSGRNAFSNFGLGLNQELSLNGNTLGFNRVPGDQYFNNASPNRFNRGDSAYNPSN
RDLWGNSPGLNLGVSVGNNRGNWGLSDTNGYGRSVGTGSGLSALSFSGNNNNTNGFDGSI
GELYRGSSVYSDSTWQQMLPHQSSNELEGLSRSYGFGIGNVGSDPSANASEGYPRSYSVG
GYRQTNRGIEA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaatctgtatcggatctggggaagctcttcattggcggcatctca
tgggacacagacgaagaacggctccgagagtattttagcaagtatggagatttagtcgaa
tccgtgatcatgagagaccgtacgacaggacgtgcacgtgggtttggtttcatcgtattc
gcagatccttctgtcgcagagagagtcatcatggagaaacacatcatcgatggccgtacg
gtcgaggcgaagaaagctgtaccacgggatgatcatcagcaagtgctgaaacggcacgct
agtccaatgcaccttatctcatcacctaaccatggtggtaatggtgggagaacaaagaag
atctttgtaggtggtttaccatcgagtatcaccgaggccgagttcaaaaactactttgat
cagtttggtaaagtttctgacgttgtggtgatgtatgatcacaacacacagaggcgacgt
ggatttggcttcatcacttttgattcagaagagtctgtggatatagttcttcacaagacc
ttccacgagcttaacggcaaaatggttgaggttaaaagagcagtgccaaaggagccttcc
caagcgtctattaaccgaagcagcccggttcttgggttcggtaataactatggagtagtc
tctaataatagctacttcaatagttttgctcctggttatattagtaacaaccctggtgga
cggtttagtcccattggtagcggtagaaatgctttctctaactttggtcttggcttgaat
caagaactgagtttgaatggaaacacacttggctttaaccgggtccctggggaccaatac
ttcaacaatgcttcaccaaaccggttcaacagaggcgactctgcttacaatcccagcaat
agagatttgtggggaaacagtccaggcttgaacttgggtgtctctgttggtaacaacaga
ggaaactggggcctttctgatactaatggctatgggagaagcgttgggacaggttctgga
ctttctgcgttatcattctctggtaacaacaacaacacaaacggttttgatggctctata
ggggagttgtacagagggagctcggtttatagcgactcaacgtggcagcagatgttgcct
catcagtcttctaatgagttagagggtttgtctcgctcttatgggtttggtattggcaat
gtaggctcagacccatctgctaatgcctctgaaggttaccctcgaagctacagtgttgga
ggatatagacaaacaaatagaggtattgaagcatag
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