Brassica napus (rape): 106445020
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Entry
106445020 CDS
T04128
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase-like
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106445020
Transfer RNA biogenesis [BR:
bna03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
106445020
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
RepC
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
106445020
NCBI-ProteinID:
XP_013741953
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Position
A4:8160419..8163521
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AA seq
461 aa
AA seq
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MEEKMKYLSLVGAGALIGSVSTVALLKLLSRSSVKQQHDETPLTKLLENSIESVTTTTTT
VTAAIGQEDLLADEIVSEHLTRNIQFFDLEAQRKVTGSYVVVIGLGGVGSHAASMLLRSG
VGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAVCLKKHFSSIFPECHVEAKVRLYDSSS
EEEILSGNPDFVLDCIDNIDTKVGLLAACVKRGLKVLSATGAGARADPTRIRVADLREST
IDPLSRSVRHRLRREHGIEGGIPVVFSLEKPKAKLLPFKGPNGEDENPSDYQVVPGFRVR
IIPVLGTIPAIFGQIMASYVITQLAGVQVQMEPIVNLDLDHYRMLHQRLIEHEEAVYGTS
AQVQVDVEEVKYIVKELWHGRSARDEAAKDVGRGMWRAMNELMLVRWDAEKPASVSNLIL
LKFKEADEHEAKTIEEVKETEADFFEKVSCVLKKAERDFYG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaatgaagtatctgagtctggtcggagcgggagctctaatcggatccgtc
tccaccgtcgccctccttaaacttctctccaggagctcagtgaagcagcagcatgatgaa
accccacttactaaactgttagaaaatagtattgaatctgtaacaacaacaacaacaaca
gttactgcagcaattggtcaggaggatcttttggctgatgaaattgtttctgaacattta
accaggaatatccagtttttcgatcttgaagctcagcgtaaagtaactggatcatatgtt
gtggtcattggtcttggaggtgttgggagtcatgctgcttctatgctgttgaggtctggt
gttgggaagctccttctcgttgactttgatcaggtgtcactttcgtcattaaatcgacac
gctgttgcaacacgagcagatgttggtatcccgaaagctgtttgtctcaagaagcatttc
tcttcaatctttcccgaatgccatgtagaagccaaggtgcggctgtatgactcatcctcc
gaagaagagattctttcaggaaatccagatttcgttttggactgcattgacaacatcgat
acaaaggtggggcttttggctgcatgcgttaagaggggtttgaaagttctgtctgcaact
ggtgcgggtgctagagctgatccaacaagaatcagagtggctgatttaagagaatccaca
attgaccctttatctcgatctgtaagacacagattgaggagggaacacggcattgaagga
ggcattcctgtcgtgttttccctcgaaaaaccaaaggcaaagctgcttccctttaagggg
ccaaacggggaagacgagaatccttcagattatcaagtagttcctggctttcgtgttcgg
atcattcctgttctaggaaccatccctgctatatttggacaaatcatggcctcctatgtt
ataacacaacttgctggtgtgcaagttcagatggagcctatagtgaatcttgatttggat
cattaccgaatgcttcatcaacgccttattgagcatgaggaagctgtttatggaacttct
gctcaagtccaggtagatgttgaggaagtgaaatacatagtgaaagagttgtggcacgga
cgaagtgctagagatgaggctgcaaaagacgttgggagaggaatgtggcgagccatgaat
gagttgatgcttgtaagatgggatgcagagaagccagcatcagtctcaaacttgattctt
ttgaagtttaaagaggcggatgaacatgaggctaagactattgaggaagtcaaggaaaca
gaagcagacttctttgaaaaagtttcatgcgtgctgaaaaaagcagagcgggatttctat
ggctag
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