Brassica napus (rape): 106445108
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Entry
106445108 CDS
T04128
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106445108
03012 Translation factors [BR:
bna03012
]
106445108
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106445108
mRNA cycle factors
Stress granule specific factors
106445108
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
eIF-4
106445108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
106445108
NCBI-ProteinID:
XP_013742062
LinkDB
All DBs
Position
A4:complement(1052715..1059090)
Genome browser
AA seq
1656 aa
AA seq
DB search
MSYNQPRPSDNQQYRRTGRSAGYQQQQQQQQPHRSSAAGYGRGAGAGAGPAPASSATVDP
SNRSFKKAQGGGQQHQPRVNLPPVNHHSNNHNGPPNVQSRSQGASGEPVIGGPGNSISGA
IPKAPTSQSPAVNSKSNEAQNTAKAVSGDPSKAFAFQFGSLGPDLMKIPARTSSAPPNMD
EQKRAQMQQASLKAAPNVPVSVPKNNSPNKAADNQVMRKEGRNPSSDKADVQVHHMSPLS
QTQKSPITHIRMPSVQTPYQQHPQVPHPVHFGAPPNMHMQPPNVAPTSFQMPMPMGLPMG
NTPQIQQQVFFQGLPSHPMHHQGMMHQAQGHGFAAPMGAQIHPQMGHVGVGMSPQYPQQQ
GGKYGGGRKTTPVKITHPDTHEELRLGGRGDPHQDVQPQGPKSHPNTPPRSHPVSAFAPR
PLNVIQTSFNTSPMIYPPASVPFNSGPMSSAQAPRFQFPVVDGSQRVQFTNQSAHTAPHV
SSDSSSVKAHVTSSAFPAPGRVTVKQAATSEKLESPKARSHEETNVALSQKKAETGLLDS
LQQPKPGSVSALSNSSAPPAKAPVETVTVATTTIGSVQIVNESSSVEDQTQTCKVEPSHN
ATEVHGQTPVSDLETKAIAAKENSRLPATNGLEKQNVPASDAPDTKIDKTAEDLNCDERT
ISGKQVEESVISDEKLETVSGVLEKAHNEVDGATDISSDSEKVAKVADDTSSELPHSTHT
QSSTVPVGHSSNSLTSAPASLSKDKPAFESNIRRTTSTKGRKKIKEILQKADAAGTTADL
YMAYKGPEEKKEIAMPSESSDVSNEKLAPAIPQDVVEATMDAEPVKNEPENWEDAADVST
PKLESVQGKPGSADEVRDGCSNTEKKYSRDFLLKFADMFTALPEGFDVSPDIANALIFVN
TGAPHHEHGKVMDRQGSSGRRPSNMVDDRWAKNQGSLPSGHGGNAGFRTGQGGNSGVLRN
PRMQQGPIMSRPMQPVGQMGGMGRNNDLDRWQRGSNFQQKGLFPSPHTPMQVMHRAERKY
QVGTVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKNVNIDNVVTLTGVISQIFDKALME
PTFCEMYADFCVHLSGALPELNEDGEKVTFKRLLLNKCQEEFERGEKEEEEASRVAEEGQ
VEQTEEEREEKRLKVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLLGYDQDPHEENIE
ALCKLMSTIGVMIDHSKAKVHIDAYFDRMKMLSGKEELSSRVKFMLINAIDLRKNKWQER
MKVEGPKKIEEVHRDAAQERQTQAKRLSRGPSMNVSGRRGHMEYSPRGGGGGMLSPPSAQ
MGGYHGPSQGRGYNNNQDIRFDERSSPAYEPRLVPMSQRSVGEEPITLGPQGGLGQGMSF
RKPAVLSNTLQSDPRRPAGGLNGVGSQRPASPVTHGRSSPQERGSTYVHREFSRASEPSS
EVSSARQVPQGPSSAVNSPRENLLSEERLQDMSLSAIKEYYSARDEKEIGLCMKDINSPA
FHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSADNVLTEAQLVKGFETVLTTLEDAVN
DAPKAAEFLGKIFGKSVTEKVVTLAEIGRLIREGGEEPGSLMEFGLGGDVLGSVLETIKS
EAGEEAFVEIHKSSGLRIEDFKPPAPNRSKILDKFT
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaaccaaccacgcccctccgataatcaacaatatcggcgaactgggcgatcc
gccggctaccaacagcagcagcagcagcaacagccgcaccgatcttccgccgccggttac
ggaaggggagccggagccggcgccggacctgctcccgcctcttccgctactgtcgatccc
tctaatcgcagttttaagaaggctcaaggaggagggcagcagcatcagcctagggtgaat
ctgcctcctgtgaatcatcattctaacaatcacaacggtcctcccaatgtacaatctcgc
tctcaaggagcgtctggtgaaccggttattggtggaccgggcaattcaattagtggagct
attccaaaggctccaacttcgcagtctcctgctgtgaattccaagagcaatgaggctcag
aacacagctaaagcagtctctggagacccttctaaagcgtttgcttttcagtttgggtca
cttggtcctgatttgatgaagattcctgctcgaactagctcagcgcctcctaatatggat
gagcagaaacgtgcacagatgcagcaagcttctttaaaagcagcaccgaacgtgccagtt
tctgtaccgaaaaataactctccaaataaggctgcagataatcaagtgatgcggaaagag
gggcgcaatccgtcaagcgataaagcagatgtgcaagtccatcatatgtcccctctaagc
caaacgcagaagtctccaattacgcatatccggatgccttccgtccagacaccttatcag
cagcatccgcaggttcctcaccctgtgcatttcggtgccccgccgaatatgcacatgcag
cctcccaatgtggctccaacctcatttcagatgccgatgcctatggggttacctatggga
aacacacctcagatccagcaacaagtgttttttcaaggtctcccatcgcaccccatgcac
catcagggtatgatgcatcaggcgcagggacatggttttgcggctccaatgggtgctcag
attcatcctcagatgggccacgtgggtgtgggtatgagcccgcaatatccccagcagcaa
ggagggaaatatggtgggggacgtaagacaacacccgtcaagattacacatcccgacacg
catgaagagcttaggcttggtggacgcggtgacccgcatcaagatgtgcaaccacaaggt
cctaaatcgcatcctaacacacctcccagatcacatccagtgtcagcatttgctccacga
ccacttaatgtaattcaaacctcttttaacaccagtcccatgatataccctccagcttct
gtacccttcaacagtggtccaatgtcatccgctcaggcaccaagatttcaatttccagtt
gttgatgggtctcagagggtacagtttaccaaccaatctgctcacactgctccacatgtt
tcatctgattcttcatctgtgaaagcacatgtgacatcatctgctttccctgcacctggg
agggtaacagtgaagcaagctgctacttctgaaaagcttgaatcacctaaagccaggtca
catgaagaaactaacgttgctctgtcacaaaagaaggccgagacaggtttattggactct
ttacagcagccgaaacctggctctgtctccgcattatcaaactcgtctgctccaccagca
aaggcacctgtggagactgtcacagttgcaacaactacgatcggaagtgtgcaaattgtg
aatgagtcgagttcagttgaagatcaaacacagacgtgtaaggtggaaccctctcataat
gcaactgaggttcatggacagactcctgtatctgatctcgaaacaaaagccattgctgct
aaggaaaattcacgacttccagctaccaatgggcttgagaagcaaaacgttccagcttct
gacgcaccagatacaaaaattgacaaaactgcggaagacctaaactgtgatgagcggact
atttcaggaaagcaagttgaagagtctgtaatttctgatgagaaactcgaaacagtatca
ggcgtgcttgagaaggcgcataatgaggtggatggtgccacagacataagttccgactct
gagaaagtagctaaagttgcagatgatacaagctccgagcttccacattctactcatact
cagtcatctacggttcctgttggacattctagtaatagtttgacatctgccccagcttct
ctttccaaggataaacctgcttttgaatcgaacataagaagaactacgtctaccaaagga
aggaagaaaataaaagaaattcttcagaaagcagatgctgcggggacaactgctgatctc
tatatggcttataaagggcctgaggagaagaaagagattgcaatgccttcggagagctct
gacgtttcaaacgagaagctggcacctgccatacctcaggatgttgttgaggccaccatg
gatgctgaaccggtgaaaaatgaaccggaaaactgggaagatgcagctgatgtttccaca
ccaaagctggaaagtgtgcagggaaagccaggttccgcagatgaggtcagagacggctgc
agtaatacggaaaagaaatactcccgcgatttcctccttaagtttgcagacatgtttact
gctcttcctgagggctttgacgtttcgcctgatattgctaacgccttgatctttgttaat
acgggtgcgcctcatcatgaacatggaaaggttatggatcggcaaggtagtagtggtcga
cgtcccagcaatatggttgatgataggtgggcgaagaatcagggttctcttccctcagga
catggaggtaacgcaggtttccgaactggccaaggaggaaactcaggagttctaagaaac
cctcgtatgcagcagggaccgattatgtctagaccgatgcaacctgtgggtcagatggga
ggaatgggcagaaacaacgacttagataggtggcaacgaggttcaaatttccaacagaaa
ggactttttccttctccgcatactcctatgcaggtgatgcacagagctgagagaaaatac
caagttggtactgttacagatgaagaacaggcaaagcaaaggcagttaaagggcatcttg
aacaagctgactccacaaaactttgagaagctgtttgagcaagttaaaaatgtcaatatt
gacaacgttgttacgcttactggtgttatctcacagatatttgacaaagctttgatggag
cctaccttctgtgagatgtatgcagatttctgtgtacatctgtctggggcgttacctgaa
ttaaatgaggacggtgagaaggttaccttcaaaagattgctactcaataagtgtcaggag
gaatttgaaagaggagagaaagaagaggaagaagccagtagagttgccgaagaaggacaa
gtagaacaaactgaggaggagagggaagagaagagactcaaagtgcggaggagaatgctc
ggtaatattagacttattggtgagttatacaagaaaaggatgttgactgagaagatcatg
cacgcatgcatccaaaaattgctcgggtatgatcaggatccacatgaagagaacattgaa
gctctgtgtaaactaatgagtacgataggagttatgatcgatcatagcaaagctaaggtc
catatagatgcatattttgacagaatgaagatgctatcaggcaaagaagaattgtcttct
agggtgaagttcatgttaattaatgccatcgatctgagaaagaacaaatggcaggagaga
atgaaggttgaagggccaaagaaaattgaggaagtgcacagagatgctgcacaagaacgc
caaactcaagctaagaggctttcacgtggaccttcaatgaatgtgtcaggaagaagaggg
catatggagtatagtcctaggggaggaggaggaggaatgctgtcacctccgagtgcccaa
atgggtggttatcatggaccatcccaaggtcgtggctataataataaccaggacattaga
tttgatgaaaggtcatctcccgcatatgagcctaggttggttccaatgtctcaaaggtca
gtaggtgaggagcctattaccttgggccctcaaggtggtcttggtcaaggaatgtcgttt
agaaagcctgcagtattgtcaaatactctgcagtctgatcctaggcgaccagctggaggt
ttgaatggtgttggctcacaaagacctgcaagtcctgttactcacggacggtcaagtcct
caagagcggggatcaacttatgttcacagggagttttctcgtgcttctgagccgtcatca
gaagtgtcatctgctaggcaagtaccgcaaggaccatcgtcagcagtaaacagccctcga
gaaaatttgttgtccgaggaacggttacaagatatgtccttgtctgccattaaggaatat
tacagtgcccgagatgagaaggagattggtttatgcatgaaagacataaattcaccagct
ttccacccaacaatgatttctctgtgggttactgattctttcgagagaaaagacaaagaa
agagatctcttggcaaagctccttgttaaccttgtgaaatctgctgacaacgtcttaacc
gaagcccaactagtgaaagggtttgaaactgtgttgacgaccctggaggatgctgtgaat
gatgctccaaaagcagcagagtttctaggaaaaatctttggtaaaagtgtgacagagaaa
gtagtgacattggcagagattggtcggttaatacgtgaaggaggagaagaaccaggaagt
ctgatggagtttgggttaggaggtgatgttcttgggagtgttttggagacaataaagtca
gaagcaggagaagaagcttttgttgagattcacaagagctcaggtctgaggattgaagat
ttcaaacctcctgcacctaaccggtctaagattttagataaatttacttag
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integrated database retrieval system
