Brassica napus (rape): 106445151
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Entry
106445151 CDS
T04128
Name
(RefSeq) syntaxin-122
KO
K08486
syntaxin 1B/2/3
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106445151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106445151
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106445151
Membrane trafficking [BR:
bna04131
]
SNARE
Syntaxin (Qa)
Stx-PM
106445151
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106445151
Exosomal proteins of other body fluids (saliva and urine)
106445151
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
STX6_10_61_N
Alpha-E
YesK
Synaptobrevin
DUF3016
MCPsignal
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
106445151
NCBI-ProteinID:
XP_013742115
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Position
A4:4588830..4590438
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AA seq
342 aa
AA seq
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MNDLLSRSFNRSVSDDSSPPHSHNIEMSKAKYSSGGSCRGGNNLDKFFLDVEEVNSDLKE
LDRLCHSLQLSHEKSKTLHNAKAVKELKDKMDSDVSTALKTAKRVKVNLKELDRANEVNR
SLPESGPGSSSDRQRTSVVNGLRKKLKDAMNNFMRVRETISTEYRDTINRLYFTVTGENP
DEDTVDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLD
MAVLVEHQGEQLEDIESHVKRANSLVRSGADKLVKARFYQKNTRKWTCYAILLLIIIVVL
VVLFTVKPWEDNGGGGGGSTRQAAPVQAQPPPPPALNRRLLR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcttctctcccgctccttcaaccgctccgtctcagacgattcatcgccccca
cactcacacaacatcgagatgtcaaaggcgaagtactcctccggcggaagctgccgcggt
ggaaacaaccttgacaagttcttcctcgacgtggaggaagtgaacagcgatctgaaagag
cttgaccgtctctgtcacagcctccagctgagccacgagaagagcaagacgctccataac
gccaaagccgtcaaggaactgaaggacaagatggactccgacgtctcgacggcgctcaag
acggccaagcgcgtgaaagtaaacctcaaggagctggatcgtgcgaatgaagtgaaccgg
agtttaccggaaagcggacccggttcatcgtctgaccggcaaaggacgtcggtggttaat
gggctaaggaagaagctaaaggatgctatgaacaattttatgcgagtgagagagactatt
tcgacggagtaccgagacactattaaccgtttgtacttcaccgtcaccggcgaaaatccc
gacgaagataccgtcgatcgtctaatctctacaggagaaagtgaaacgtttttgcagaaa
gcgatacaagaacaaggtcgaggtaggattttggacacaataaacgagatacaagagaga
cacgacgcagtgaaagacattgagaagagcttgaacgagctgcatcaggtgtttcttgat
atggccgtgttggttgagcaccagggtgaacagctcgaggacattgaaagccacgtcaaa
cgagcaaactcgcttgttcgatctggtgcggacaagcttgttaaggcgcggttctaccag
aagaacacgcgcaagtggacttgttatgccattttgctattgatcattattgtggtttta
gttgtgttgtttactgttaagccttgggaagataatggtggtggtggtggaggttcgacc
cgccaagctgctccggtgcaagctcagccaccgccacctccagctctgaaccggcggcta
cttcgttaa
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