Brassica napus (rape): 106445201
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Entry
106445201 CDS
T04128
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106445201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106445201
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
106445201
INO80 complex (yeast)
106445201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
106445201
NCBI-ProteinID:
XP_013742170
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All DBs
Position
A4:complement(1891749..1899129)
Genome browser
AA seq
1479 aa
AA seq
DB search
MDRSRRSDSRYATLFNLEPLRNFTIPRHEDEVENYDETRSNQVANYGNGVKKRKRWIEEA
GDDDDDHYNQHITEEHYRSMLEEHVQRLKSSSRESQGNHTSLMRKSNVGSYRGNGQRGRF
YDADAISQGRGSYRGSAITPKIAYEPSYLDIGNGVVYKIPPSYDKLVASLNLPSFSDLRV
EDFYLRGALDLRSLEEVMASVKRSGVRSRNGMGEPRPQYESLQARVKALSASNSNPKFSL
KVSEDAINSVIPEGAAGSTARTILSEGGVLQVHYVKVLEKGDTYEIVERSLLKKLKVKND
PAVIEKTERDKIRKVWINIVRRDIPKHHRVFTNFYRKQSIDAKRFADGCQREVRYKVARS
YKLPRSAPIRTRKISRDMLLFWKRFDKQMAEERKKQEKEAAEALKREQELREAQRQQQRL
NFLIKQTELYSHFMQNKTDSKPSESFSIGDENLVEEELREPAAEEPSEVEDPEDAKMKAD
ALKAAQEAVSKQKKITDAFDTESMKLRQTSDMDGPPNDVSVSGSGNIDLHNPSTMPATST
VQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW
GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHIL
ITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKNSTSIRWKTLLSFNCRNRLLLTGTPIQNN
MAELWALLHFIMPMLFDSHEQFNEWFSRGIENHAEHGGTLNEHQLNRLHAILKPFMLRRL
KKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHFNEKKLLNLMNIV
IQLRKVCNHPELFERNEGSSYLYFGVMSNSLLLPPFGELEDVHYSGGQNPITYKIPKLLQ
KEMLQSSETFCSSIRRGLSRESFLKHFNIYSPESIFRSIFSSDSSVDQAVSGSGAFGFSR
LMDLSPSEVGYLALCSAMERLLFSILKWERQFLDEILDSVMEFVDDDLSGGNITRGKTRA
VTRMLLMPSKLETSLLKGKRGTRPTCHSFESLVVSHQDRLLSNIKLLHSTYTFIPKARAP
PVSVHCSDRNFAYGTTEEMHQPWLKRLLIGFARTSEANGPRKPNNLPHPLIQEIDSELPV
VQPALQLTHRVFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKML
NILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQQRSDIFVFLLSTRAGGLGINLTAADT
VIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMT
GGHVQGDDVFGTADVVSLLMDDAEAAQLEQKFRELPLQVRDRQKKKQPVKCIRIDAEGDA
ALEELEDAAERQDKEQEPSQEPEKTKPSNKKRKAAASTPKLRVPPKANEEGDAPLQPQRT
KRVKRQTKSVNESLEPIFSASVTAANGEVNPSSSNPDAN
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcaagaaggagtgactcgcgttacgcaactctcttcaatctcgagccgttg
aggaacttcacgattcctagacatgaagatgaggttgagaattatgatgaaactagaagc
aatcaagttgctaactacggcaacggcgttaagaagagaaagcggtggatagaagaagct
ggtgatgatgatgatgaccattacaatcaacatattactgaggagcattacagatcaatg
cttgaggagcatgtgcaaagactcaaaagtagctccagggagtctcaggggaatcacaca
tctctgatgcggaagagcaatgtgggcagttacagaggaaatggtcaacgtgggagattc
tatgacgcggatgcgatctcacaagggcgaggaagctatcgtggttcagctattacccct
aaaatagcatatgagccttcgtatttggatattggtaatggtgttgtttacaaaatccct
ccaagttatgacaagctggtggcgtcattgaacttacctagcttttcagatcttcgtgtg
gaagatttttacttgagaggagctctggatctgagatcattagaagaagtgatggctagc
gttaaaaggtctggagttagaagccgtaatggaatgggtgagcctcgacctcagtatgaa
tctcttcaagcgagagtgaaggccttgtcagcttcaaactccaacccaaaatttagcctc
aaggtgtcagaagatgcaattaactctgtcattccagaaggagctgctggaagcacggca
cggacgattttatcagagggtggtgttttacaggtccattacgtgaaggttctggagaag
ggggatacatatgagattgttgaacgaagtctgctgaagaagctgaaggtgaagaatgat
cctgcagtcattgagaagacagaaagggacaagattagaaaagtctggatcaacattgtc
agaagagatataccaaaacaccatagagtcttcactaacttttatcggaaacaatcaatt
gatgccaagagatttgctgatggttgccaaagagaggtgagatataaggtggctagatca
tacaaattgccaaggagtgcaccaattcgcaccaggaagatatccagagacatgctgcta
ttctggaagcggtttgacaagcagatggcagaagagaggaaaaaacaggagaaggaagct
gcagaggcattaaaacgcgaacaggagcttcgagaggcgcaaaggcagcaacagaggctc
aattttcttattaaacagactgaactttacagtcacttcatgcaaaacaaaaccgattca
aagccttcagaatccttttcgataggagatgaaaatctggtcgaagaagagctccgagaa
cctgcagcagaagaaccttctgaggtggaggatcctgaagatgctaaaatgaaggcagat
gccctgaaagctgcccaagaggcagtatctaagcagaaaaaaataacagatgcgtttgac
actgaatctatgaagctacggcaaacttctgacatggacggaccaccaaatgatgtctca
gtctctggctcgggcaatatagacttgcacaacccatctacaatgcctgcaacatcaaca
gttcagactccagagttgtttaaaggaactctaaaagaataccaaatgaaaggccttcag
tggctagtcaattgttatgagcagggtctgaatggcattcttgctgatgaaatgggcttg
ggtaagactattcaagctatggcgttcttggcacatttggctgaggagaaaaacatctgg
ggtccatttctggttgttgcccctgcttctgttcttaacaattgggctgatgaaattagt
cgtttctgtcctgacttgaaaactcttccatattggggaggattacaagaacggacaatc
ttaagaaagaatatcaatcccaagcgtatgtacagaagggatgctggttttcatatttta
attaccagctatcagctactagtaaccgatgaaaagtattttcgccgggtcaaatggcaa
tatatggtgctagatgaggcccaagcaatcaaaaattccaccagtataagatggaagacc
cttcttagtttcaactgtcggaaccgattgcttctgactggtactccaattcagaataac
atggcagaactatgggccctgctgcacttcatcatgccaatgttgtttgacagccatgaa
caatttaacgagtggttctcaagaggaatcgagaatcatgctgaacatggaggcactttg
aacgagcaccagcttaacagactgcatgcaatattaaagccattcatgctacgacgtctc
aaaaaggatgtggtttctgagctaaccacaaagacagaagttactgtacactgcaagctc
agttctcgacagcaagctttttatcaagctattaagaacaagatttctctggctgagttg
tttgacagcaaccgtgggcatttcaatgaaaagaaattattgaacttgatgaatattgtc
attcaacttagaaaggtttgtaaccatccagagttgtttgaaaggaatgaagggagctcg
tatctctactttggagtgatgtccaattctcttttgctgcctccctttggtgagctagag
gatgtacattattccggtggtcaaaatcccataacatacaagatacctaaactcctgcag
aaagaaatgctccaaagctctgaaacattttgttcttccatcaggcggggcttatcaaga
gaatccttcctgaagcattttaatatatattcacctgaaagtatttttaggtcaatattc
tcatctgatagtagcgtagatcaagcagttagtggaagtggagcatttggcttttcacgc
ttgatggatttatcaccatcagaagttggatatctagctttgtgttccgccatggaaaga
ctattgttctctatattgaaatgggagcggcaattcttagatgaaatattagactctgtt
atggagttcgtcgatgatgatcttagtggaggtaacatcacaagaggtaaaaccagagct
gtcacaagaatgctgctgatgccatcaaaacttgaaacgagtttgctgaaagggaaacga
ggcacaaggcctacatgtcactcatttgaatctctagtggtttctcatcaggataggcta
ctttcaaatatcaaactcctacattctacatatacttttatcccaaaagccagagctcca
ccggtaagcgttcattgctcggatagaaactttgcatacggaactacagaggagatgcat
cagccatggcttaagagactattaatcggctttgcacgaacttcagaagctaatggacca
aggaagccgaacaaccttccacatcctttgatccaagaaattgattcagaacttccagtt
gtacaacctgcgcttcagttgacacaccgagtatttggttcttgtcctccaatgcaaagt
tttgaccctgcaaagttgctaacggactctgggaagctgcagacgcttgatatattattg
aagcgacttcgagctgggaatcacagggtgctcctgtttgcacaaatgacaaagatgctg
aatattctcgaggattacatgaactatagaaagtacaagtatctcaggcttgatggatcc
tccaccatcatggatcgccgagatatggttagggattttcagcagaggagcgatattttt
gtattcttgctgagcaccagagcaggaggacttggtatcaacttgacggctgctgacaca
gtcattttctatgaaagtgattggaatcccaccttggatttacaagctatggacagagct
catcgtcttggtcagactaaagatgtaactgtttatcggctcatctgcaaggagacggtg
gaagagaaaattttgcacagggcaagtcagaaaaatacagtacaacagcttgtaatgaca
ggaggtcatgttcagggtgatgatgtttttggaactgcggatgtggtatcgttgcttatg
gatgatgcagaggcagcacaactggagcagaaattcagagaactaccattacaggtaagg
gacaggcagaagaaaaaacagccagtgaaatgtatcagaatagatgctgaaggagatgca
gctttggaagagttggaagatgctgctgaacgacaggataaggaacaggaaccttcccaa
gaaccggagaagacgaaacccagtaacaaaaagagaaaagctgctgcttcaactccgaaa
cttagagtccctcccaaagcaaatgaagaaggagatgctcctcttcagcctcagagaaca
aaaagggtaaagagacaaacaaagagcgtaaacgagagtcttgaacctatcttctctgca
tcagttaccgcagcaaatggagaagtcaatccaagtagctctaatccagatgctaactaa
DBGET
integrated database retrieval system
