KEGG   Brassica napus (rape): 106445225
Entry
106445225         CDS       T04128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RZF1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106445225
   04121 Ubiquitin system [BR:bna04121]
    106445225
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106445225
Membrane trafficking [BR:bna04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    106445225
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106445225
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-C3HC4 zf-RING_11 zf-RING_5 zf-C3HC4_3 Rad50_zn_hook zf-ANAPC11 CxC4 DpnI zf-Nse zf-C3H2C3 zf-HC5HC2H zf-FPG_IleRS IBR_1 Zn_ribbon_6 zf-RING_16
Other DBs
NCBI-GeneID: 106445225
NCBI-ProteinID: XP_013742195
LinkDB
Position
C4:complement(33961412..33963358)
AA seq 301 aa
MSSGRNTHWCHRCQRGVYLRGRDSLSSYCGGGFVEEIDVTPHSSTLDMLRAHRDVERDPT
FDLMEAFSAFMRSRLAERSYDRESFSSIAPFLIFGGQANNHTAVEALINGSPAIGITRGN
NTNAGDYFYGPGLEELIEQLSSGISHHRGPPPAAKSSIDALPTIKITQKHLKSSDSHCPV
CKEEFELKSEAKQMPCKHVYHSDCIVPWLVQHNTCPVCRKELPSRGSSSSTQSDQNRSTS
RRRNPFSSLWPFRSSSASSTQNRRDTNNKANTEEGQYTHHHHHQHQQQQSNMGYSGWPFD
Y
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtctagtggtcgaaacacacactggtgtcacagatgccaacgtggtgtttaccttcgt
ggtcgagactctctctcttcctattgtggaggagggtttgtcgaggaaatcgatgtaacg
cctcatagtagcaccttagatatgcttagagctcacagagatgttgagcgtgatccaacg
tttgatctcatggaagctttctcagcttttatgagaagccgtttagcggaaagaagctac
gaccgtgaaagcttttcaagtatagctcctttcttgatctttggtggccaagctaataat
catactgcagtggaagctttaatcaacgggtcaccagccattggtatcactcgtggcaac
aacaccaatgctggagactacttttacggaccgggtcttgaagagttgattgagcagctt
tcgtcagggattagtcaccatagaggtccaccacctgcagcgaaatcatctattgatgca
ttaccaacaatcaagatcacacagaagcatctcaagtcgtcagactctcactgtccggtt
tgcaaagaggagtttgagttgaagtcagaagcaaaacagatgccgtgtaaacatgtgtat
cattctgactgtatcgtcccgtggctggttcagcataatacgtgccctgtttgtcgtaaa
gagttaccatcaagaggttcgtcttcaagcacacagagtgatcagaacagaagtaccagt
agaagaaggaaccctttctccagtctctggccatttcgctcgtctagcgcaagctctaca
caaaaccgcagagatacaaacaacaaagccaatacagaagaaggccagtatactcatcac
catcatcaccagcatcagcaacaacaatccaatatgggttatagtggatggccttttgac
tattaa

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